Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0871 ATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCGTGCTTGAAGCCGCTCAGGCGGTATGCCCGCATGAACAAGGATGATGTGGATGATCCTTCCTCGATTGATGACTCTCTGCTATGGTATAAGGACCTCGAGAAACACTCGTGCGGCGAATTCTCTTATGCTGTGGTTCAGGCCAATGAAATTATCGAGGATCACAGCCAGGTCGAGACTGGCTCCGACGCAATGTTCATCGGAGTATACGACGGCCACGGCGGTCCCGAAGCGTCTCGGTTCATCAGCGACCACCTCTTCCATCATCTAATGAGGATAGCTCGAGATAATGGTACTATATCTGAAGATATCCTGAGAGGTGCTGTTTCTGCGACTGAAGATGGATTTCTGACTTTTGTTCGAAGGACTTATGGTATAAAGCCATTGATGGCGGCAATCGGTTCCTGTTGTCTTGTGGGGGTTATTTGGAAAGGGACATTATATGTCGCCAACCTTGGAGACTCTCGTGCAGTAATTGGTTCTGTTGATAGATCTAATAAGATCGTTGCTGAGCAGTTGACTAGAGAGCACAATGCTAGCAAAGAGGAGGTTCGACGTGAACTTAGGTCCTTGCATCCTGAAGATTCACAGATTGTAGTCATGAAGCATGGAACGTGGCGCATTAAGGGAATCATCCAGGTATCTAGATCTATAGGTGATGCATATTTGAAAAGACCAGAGTTTTCTCTTGATCCTTCGTTCCCACGATTCCACCTACCGGAAGCTATCCGGCGTCCTGTGCTGACAGCCGAGCCATCTATATGCTCGAGGGTCCTACAACCTAATGATAAGTTCCTAATATTTGCGTCTGATGGACTTTGGGAACACTTGACAAATCAGGAAGCTGCAGAGATCGTGCATAACAATCCCCGAACGGGGATAGCAAGAAGACTGCTTAAAGCCGCTCTGAACGAGGCGGCTAGGAAACGAGAAATGAGGTATAAAGATCTGCAGAAGGTTGAGAAGGGGATCAGGAGGTTCTTTCATGATGATATCACGGTCGTGGTTGTCTTCATCGACCACGAGATGGTTGGGAAGAATATTGCAGTACCTGAACTGTCCATCAGAGGCTTCACTGACACGGTTGGTCCATCCAATTTTAAGGATCTCATCCCTGTTTATTCTGAACATTTCTTGGTGCCTAACCTTTACAAATCGACACGTCATCGTTTGGTAGACTGGCGCTCTTTTTCTTTGGGAAAGGGGAGGGAGGTTCTTAGAGTTTACAGAAAAGAGACAGACATTGAAGTGTGA 1284 0.4688 MFSWLARIVSACLKPLRRYARMNKDDVDDPSSIDDSLLWYKDLEKHSCGEFSYAVVQANEIIEDHSQVETGSDAMFIGVYDGHGGPEASRFISDHLFHHLMRIARDNGTISEDILRGAVSATEDGFLTFVRRTYGIKPLMAAIGSCCLVGVIWKGTLYVANLGDSRAVIGSVDRSNKIVAEQLTREHNASKEEVRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEAIRRPVLTAEPSICSRVLQPNDKFLIFASDGLWEHLTNQEAAEIVHNNPRTGIARRLLKAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVVFIDHEMVGKNIAVPELSIRGFTDTVGPSNFKDLIPVYSEHFLVPNLYKSTRHRLVDWRSFSLGKGREVLRVYRKETDIEV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0871 427 ProSiteProfiles PPM-type phosphatase domain profile. 47 349 IPR001932 -
Lele15g0871 427 SUPERFAMILY PP2C-like 54 350 IPR036457 -
Lele15g0871 427 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Lele15g0871 427 Pfam Protein phosphatase 2C 67 318 IPR001932 -
Lele15g0871 427 FunFam Probable protein phosphatase 2C 42 41 357 - -
Lele15g0871 427 Coils Coil 180 200 - -
Lele15g0871 427 PANTHER PROTEIN PHOSPHATASE 39 347 - -
Lele15g0871 427 Gene3D - 32 358 IPR036457 -
Lele15g0871 427 SMART PP2C_4 44 347 IPR001932 -
Lele15g0871 427 CDD PP2Cc 51 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0871 Lele-ChrLele15 5040205 5042905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0871 1 377 PP2C-type Phosphatase Gene Family AT5G06750 70.361 0.0 557