Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0864 ATGGGGGAACAGACACCTGATGCGATGAACCTCGATTTGAATTTGGGTCCCATTCCGGAGCCACCGGCCGATTCCATAGCCAGCGAACGTGCGGTCTCAGCGGATGACTGGACCGAGCAACCTGTTCGCCGAGTTAGTGACGCTCGTCGGTATAGGTCTCGACTACAATGGAGATCGCATAATCTTCTTCTCCCACCCGATGCCCAGCGGCATGTTAACCCGCCGCCTGAATCCCAAAATATTTCGATGGAATTAAATCAATTTGTGGAGACCCCTGCCATTGGGACTGCTCTGCAGGATGATCGGGACAGTGTTGAAGCTGACCTAAGATCAGGGGAGGTACAAAAAGCATGTGAAAACAACAACAGCTTAACGGGGGATGAGGAATCAGAGAAGAAGGATGATGTTGAAAAGGGTATTGGCAATGCTGGGAGCTTTTTTGATTGTAATATCTGCTTGGACCTGGCCAAGGATCCTGTTGTGACTTGCTGTGGCCATTTGTTTTGTTGGCCTTGCCTCTATCGATGGCTACATATGCATTCAGAAGCCAAGGAATGTCCTGTTTGTAAGGGTGAGGTTTCATACAAAAATGTCACCCCAATTTATGGTCGTGGAAACAACAATGTTCAAGATCCTGAGGAAGATCCCACTCTCAAAATCCCTCTCAGGCCCCATGGAAGGCGTGTTGAGAGTTTAAGACCAACCTTTCAGAGAAGTGCATCTGGAAACCCCATGGAGGAGATGATTAGGCGTCTCGGAGGAAGAGTTGATCTTGCTCGGGGTCTGGTTCGCCCGCATGATCCTGAAACCGTGCGTGAAACAGCAGAGAGAACAAGCTTCTTGCTGAACAGGTTTTTGACTTCTCGAGCAATTCGGAGAGAGCAAAATCTCGAGGCGTCCCCAGATGATGCAGGATATCTAACGGGGAACAATATGGGTAATCTTGACGCAGGGGATAATGGCAGGCTGCAATCACTTCTGCTTCGAAGAACACAGTCACACAGAGCAACACTTTCATCTTTTTCCTCAGCTTTAAGCTCTGCAGAGCGAGTGGTGGAGACATATTTCCGGACCCGTGCGGGAGGTAGAAGCCAAGAACAAGCTCCACCGGTGGATGATAGAGATTCATACTCAAGCATTGCTGCTGTTATAAATTCAGAGAGTCAAGTGGACACTGCCGTGGAAATTGATTCCATGGTATCACTGTCTACATCCTCTTCGAGAAGGAGGAACGATTCTTCTAGAGTTTCTGATGTAGATACTGGAGACTCTCGTGTTCCTAGGCCTAGGCGAAGACGTTTAAATTGA 1308 0.4855 MGEQTPDAMNLDLNLGPIPEPPADSIASERAVSADDWTEQPVRRVSDARRYRSRLQWRSHNLLLPPDAQRHVNPPPESQNISMELNQFVETPAIGTALQDDRDSVEADLRSGEVQKACENNNSLTGDEESEKKDDVEKGIGNAGSFFDCNICLDLAKDPVVTCCGHLFCWPCLYRWLHMHSEAKECPVCKGEVSYKNVTPIYGRGNNNVQDPEEDPTLKIPLRPHGRRVESLRPTFQRSASGNPMEEMIRRLGGRVDLARGLVRPHDPETVRETAERTSFLLNRFLTSRAIRREQNLEASPDDAGYLTGNNMGNLDAGDNGRLQSLLLRRTQSHRATLSSFSSALSSAERVVETYFRTRAGGRSQEQAPPVDDRDSYSSIAAVINSESQVDTAVEIDSMVSLSTSSSRRRNDSSRVSDVDTGDSRVPRPRRRRLN 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0864 435 MobiDBLite consensus disorder prediction 411 429 - -
Lele15g0864 435 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 120 308 IPR045103 GO:0005783|GO:0006511|GO:0061630
Lele15g0864 435 MobiDBLite consensus disorder prediction 400 435 - -
Lele15g0864 435 CDD RING-HC_AtRMA_like 147 191 - -
Lele15g0864 435 MobiDBLite consensus disorder prediction 1 39 - -
Lele15g0864 435 FunFam Zinc finger family protein 130 203 - -
Lele15g0864 435 Pfam Zinc finger, C3HC4 type (RING finger) 149 189 - -
Lele15g0864 435 ProSitePatterns Zinc finger RING-type signature. 164 173 IPR017907 -
Lele15g0864 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 213 IPR013083 -
Lele15g0864 435 ProSiteProfiles Zinc finger RING-type profile. 149 190 IPR001841 -
Lele15g0864 435 SMART ring_2 149 189 IPR001841 -
Lele15g0864 435 SUPERFAMILY RING/U-box 143 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0864 Lele-ChrLele15 5007350 5008657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0864 1 424 C3H Transcription Factor Family AT3G58030 51.467 9.26e-120 354