Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0862 ATGTTGACCAACTCGATACCGTTTCACAGCCCTGCTTCATTTAAGAATAGGAACACTGCTATTGCTACAATCACATATAGGAAGCGTGGCCGCTACCTTCCAAGCTTGTCTTCTTCCTGCTTTCAAAAGCATTCAGATTCAATTCGCTGCTTTATCTTTACACCAGAAAACCATTCCCGAGTCTTACCGGTTCGGGACTTGTCTCTTTCTTGCCTAAAGATGGAGCTGGCTTTGAGCTTGGGAGACGCACCAAAGGGGCTCCCTATACTGGACAAGGCCCCAAGAATGCCTAACAAGGAAGCTGGTTTCTGCAGGGCACTCGGCCAAGGTCTCTCTGTGAAAGCTTCCGATCATAATAGGGCCAGTCCCACACAGGTCGTAGATGAGATCAGAGCGTCTTCAGATCCGCCTCTTCAGTTAGACCTTCTTCCCTTCACGCCTGTTCCTCGACCCCACCCAGCTTCCCATCTTCGGATTCCTTGGCTCTCCGATTCTTTGGGATCTCAACATTTCTCGCCGGATGGAGGAGCCAAGGAGTTGGACGTCAACCGTTTGCCGGCAGCAGGAGCGGAGGAGGCGGACGACGATACTCCGCTGTCGTCGTCTCCTAACAGTGTGTCGTCATTTCACATGGACTTCTACATGAGGTGTGGTTACGCGGGCAGTAAAAGCAAGAGGGAGGTTGAGGGTGAAGGTGAAAGAGCTAGTTCTAGGGCCAGTGACGATGATGAAAACGGGTCGACTCGCAAGAAACTCAGGCTATCCAAGGAACAATCAGCTTTTCTTGATGAAAGCTTCAAAGAACACACTACTCTTAATCCCAAGCAGAAACTGGTTCTGGCAAAACAGTTAAATCTTCGTCCTCGTCAAGTGGAAGTTTGGTTTCAGAACAGAAGGGCAAGGACAAAGTTGAAGCAGACGGAAGTAGATTGTGAGTATCTGAAGAGATGCTGCGAGACGCTGACAGAAGAGAATAGGAGGTTGCAGAAGGAACTGCAAGAACTGAGGGCATTAAAGAAGTCTCAGCCATTTTACATGCAGCTTCCAGCTACCACTCTGACAATGTGCCCCTCCTGCGAAAGGGTGGCCACCAACTCATCATCGTCTGCCTCCGCATTGACCACCGTCACGGCCCGCAACAACGCTTCTAAGGCATCTCCACTCATGTCTCTCACCAACGCCAGAACGGTCCAGACTCATCGCACTCCGTCGTGA 1215 0.5053 MLTNSIPFHSPASFKNRNTAIATITYRKRGRYLPSLSSSCFQKHSDSIRCFIFTPENHSRVLPVRDLSLSCLKMELALSLGDAPKGLPILDKAPRMPNKEAGFCRALGQGLSVKASDHNRASPTQVVDEIRASSDPPLQLDLLPFTPVPRPHPASHLRIPWLSDSLGSQHFSPDGGAKELDVNRLPAAGAEEADDDTPLSSSPNSVSSFHMDFYMRCGYAGSKSKREVEGEGERASSRASDDDENGSTRKKLRLSKEQSAFLDESFKEHTTLNPKQKLVLAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKKSQPFYMQLPATTLTMCPSCERVATNSSSSASALTTVTARNNASKASPLMSLTNARTVQTHRTPS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0862 404 FunFam Homeobox-leucine zipper protein HAT22 253 299 - -
Lele15g0862 404 Gene3D - 253 303 - -
Lele15g0862 404 SMART halz 305 348 IPR003106 GO:0006355|GO:0043565
Lele15g0862 404 CDD bZIP 298 337 - -
Lele15g0862 404 MobiDBLite consensus disorder prediction 224 253 - -
Lele15g0862 404 SMART HOX_1 247 309 IPR001356 GO:0003677
Lele15g0862 404 SUPERFAMILY Homeodomain-like 240 306 IPR009057 -
Lele15g0862 404 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 110 380 - -
Lele15g0862 404 Pfam Homeodomain 249 303 IPR001356 GO:0003677
Lele15g0862 404 ProSiteProfiles 'Homeobox' domain profile. 245 305 IPR001356 GO:0003677
Lele15g0862 404 CDD homeodomain 249 306 IPR001356 GO:0003677
Lele15g0862 404 ProSitePatterns 'Homeobox' domain signature. 280 303 IPR017970 GO:0000981|GO:0006355
Lele15g0862 404 Coils Coil 311 341 - -
Lele15g0862 404 Pfam Homeobox associated leucine zipper 305 339 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0862 Lele-ChrLele15 4996696 4998437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0862 137 369 Homeobox Transcription Factor Family AT5G47370 52.590 1.08e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele15g0862 Homeodomain 3.9e-14 CL0123