Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0853 ATGCCACATCATGAAGGAAGTACTTCTGGTGAGAGCTCTGAGCCTACAAAACGTTACAAATGCTCAACGTGTTGCCTGAGTTTTCAGTCGGTTAACGCGTTATGTGGTCATCAGAATGCGCACCGGAAACATCGCAACCAAATGCGGAAGTTTCTGAACAGTAATCAAGCATCAAAGAATAAGAAATACTACGAGTTCATGCCCTTGAAGGAGGGAAATGTTGGCATCTATGGTTACGGACGTGACTTCCAGAAGCCTATCGTTCGTCTTGGACGACCAAAAACCATTAAACTGGACCTCACTCTCAAACTTTGA 315 0.4444 MPHHEGSTSGESSEPTKRYKCSTCCLSFQSVNALCGHQNAHRKHRNQMRKFLNSNQASKNKKYYEFMPLKEGNVGIYGYGRDFQKPIVRLGRPKTIKLDLTLKL 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0853 104 Gene3D Classic Zinc Finger 3 73 - -
Lele15g0853 104 PANTHER ZINC FINGER PROTEIN 5 9 63 IPR044299 GO:0010090
Lele15g0853 104 SUPERFAMILY beta-beta-alpha zinc fingers 16 46 IPR036236 -
Lele15g0853 104 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Lele15g0853 104 ProSitePatterns Zinc finger C2H2 type domain signature. 21 41 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0853 Lele-ChrLele15 4961758 4962072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0853 3 58 C2H2 Transcription Factor Family AT5G06650 40.351 3.22e-07 44.7