Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0849 ATGCCGGCAGGTCATGGGTTGAGATCTCGTACCCGAGACTCGTTTTCTCGGCCATTCAGGAAGAAGGGTACCATCGCCCTCACCACTTACCTTCGCACCTACAAGATTGGTGACTACGTCGACGTCAAGGTCAATGGCGCTGTCCACAAAGGTATGCCTCATAAGTTCTACCATGGTCGTACCGGCCGTGTCTGGAACGTCACTAAGCGCGCTATCGGCGTCGAGGTGAACAAACAGGTTGGCAACAGGATAATCAGGAAGAGAATTCATGTGCGTGTTGAGCATGTGATGCCTTCAAGGTGCACGGAGGAGTTCCGTCAGAGGAAAATTAAGAATGATCAGTTGAAGGCAGAGGCCAAGGCCAAGGGAGAGGTGATCAGTACTAAGAGGCAGCCTGAGGGTCCTAAGCCAGGAGATAATAGCCCAATTCATGAAATGCAGACCCTGACTTCAATGCAGACCCCTGACTTCAAGGGCAGATATAAGTGCAGACACAATGAAATATCTGCAATCCAAAGTGTGCACGTCCTCCCCAACCTCTGTACAAGTTCATTCACTCTTCTTGAAAAGCAAGAACATCACATTTGTTTGGATCTAGCTCCACTGAACAAAAGCTTCTGGCTTTGGCTCCACCCTCCATCAACACAGCTGAGCAAGTCCCAAATCGGATCATCACAGACAGGAAAAAAATCAAACAAAGAGAAAAGCAGGTGGAATTCTGCAGAGATGATGTGA 735 0.4871 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRQRKIKNDQLKAEAKAKGEVISTKRQPEGPKPGDNSPIHEMQTLTSMQTPDFKGRYKCRHNEISAIQSVHVLPNLCTSSFTLLEKQEHHICLDLAPLNKSFWLWLHPPSTQLSKSQIGSSQTGKKSNKEKSRWNSAEMM 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0849 244 MobiDBLite consensus disorder prediction 114 146 - -
Lele15g0849 244 MobiDBLite consensus disorder prediction 216 244 - -
Lele15g0849 244 PANTHER 60S RIBOSOMAL PROTEIN L21 1 153 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele15g0849 244 Gene3D - 99 153 - -
Lele15g0849 244 FunFam 60S ribosomal protein L21 99 153 - -
Lele15g0849 244 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Lele15g0849 244 FunFam 60S ribosomal protein L21 1 98 - -
Lele15g0849 244 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Lele15g0849 244 MobiDBLite consensus disorder prediction 114 129 - -
Lele15g0849 244 MobiDBLite consensus disorder prediction 230 244 - -
Lele15g0849 244 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele15g0849 244 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0849 Lele-ChrLele15 4933086 4936380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0849 1 161 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 73.171 1.23e-85 250