Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0848 ATGCTGACCGTGGTTCGCGTACACCTCCCCTCTGATATACCCATTGTAGGCTGTGAGCTCACGCCGTACTTGCTCATACAGCGACAAGACAAGCTTTTTGTTACCCACGATGATGTCCCTGAGACGGCCCCTTTAGATGGCCATTTCTTGCGGTATAGGTGGTATCGTGTACAAAGTGATAAAACGGTTACTGTCTGTAGCATACATCCGTCTGAGCAGGCCACGCTGCAGTGCCTTGGCTGTCTTAAGGCCAAAATACTTGTTACCAAAAGTTATCATTGCACACCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTCTTTTACATGATCGTGCTGCAAGTGCGGTCAATGAAAATGGAACTGAAGAGGAGGAACTATTTGGACGTTACAATGGCACTGGCTCTGGGGCAGTTAATAACAGTTTATCTGGCTCTGCTTCAAGCGCTAGCTTGGCAAATGTGTCAGCTCCTCTGTATCCAGCTGCTGTTACACAACGAAGTGGTGGGGAAACTTGGATTGAGGTTGGACGATCTAAAACGTATACCCCAACAGCTGACGATGTTGGTCATGTCCTTAAATTTGAGTGTGTTGTAGTTGATGCAGAGGCAAAAGTTCCTGTAGGGCATGTTAGTACTATACTAACTTCTCGTGTTATTCCTGCTCCCTCTCCTATTCCGCGCTGTTTGATTCCTGTTGATGGGATGGCACATATAGATGTAGATGCACGCATAACATCTTCAGGAACATTCACTGTTCTATCTTACAACATTTTGTCTGATGCTAATTCTTCAAATGAATTATATAGTTACTGTCCTCCATGGGCTCTTTCTTGGCCTTACCGCAGGCAAAATTTGTTAAGAGAAATAGTTGGTTATCGGGCAGATATTATTTGTCTTCAGGAGGTACAAAGTGATCATTATGAGGATTTTTTTGCTACTGAACTGGACAAACATGGTTATTATGGTCTATACAAGAGAAAAACCAATGAGGTATTTGGCAGCAACACCAACACAGTTGATGGTTGTGCAACCTTTTTCCGTAGAGACAGATTTTTGCATGTGAAGAAATACGAGGTTGAATTTAACAAGGCTGCACAGTCTTTAACTGATGCTATGATTCCAACAGGCCAGAAGAAAGTTGCGTTAAATCGGCTGGTTAAGGACAACGTTGCACTAATTGTGGTTCTAGAAGCAAAAGTTAACAATCAGCTAGTTGACACTTCTGGAAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTACACCAAGACTTAAAAGATGTTAAACTCTGGCAGGTGCACACACTCTTAAAAGGGTTGGAGAAAATTGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGAGATTTTAATTCGGTTCCTGGAAGTGCTCCACATTCACTTCTTGCATTGGGGAAGGTAGATCAAACTCATCCAGATTTAGCAGTTGATCCACTTAATATACTGCGGCCACACAACAAGTTGGTTCATCAATTGCCACTGGTTAGTGCATACTCATCCTTTGGAAGAACCGTAGGTCTTGGATTTGAGCAGCACAGAATGAGAGTGGATAGTGCAACAAATGAACCCTTATTCACAAATGTCACCAGGGATTTTATTGGCACTCTAGATTACATATTCTACACAGCGGATTCATTGGTGGTGGAGTCACTATTGGAGCTATTGGATGAGGAGAGTTTGAGGAAAGACACAGCACTTCCCTCTCCTGAATGGTCATCTGATCATATAGCTCTGTTAGCTGAATTTCGCTGCTGCAAGAATAGATCTAGGCGTTAA 1806 0.4286 MLTVVRVHLPSDIPIVGCELTPYLLIQRQDKLFVTHDDVPETAPLDGHFLRYRWYRVQSDKTVTVCSIHPSEQATLQCLGCLKAKILVTKSYHCTPKCFSDAWQHHRLLHDRAASAVNENGTEEEELFGRYNGTGSGAVNNSLSGSASSASLANVSAPLYPAAVTQRSGGETWIEVGRSKTYTPTADDVGHVLKFECVVVDAEAKVPVGHVSTILTSRVIPAPSPIPRCLIPVDGMAHIDVDARITSSGTFTVLSYNILSDANSSNELYSYCPPWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEDFFATELDKHGYYGLYKRKTNEVFGSNTNTVDGCATFFRRDRFLHVKKYEVEFNKAAQSLTDAMIPTGQKKVALNRLVKDNVALIVVLEAKVNNQLVDTSGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLALGKVDQTHPDLAVDPLNILRPHNKLVHQLPLVSAYSSFGRTVGLGFEQHRMRVDSATNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0848 601 CDD Deadenylase_CCR4 253 594 - -
Lele15g0848 601 Pfam Endonuclease/Exonuclease/phosphatase family 254 585 IPR005135 GO:0003824
Lele15g0848 601 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 162 594 - -
Lele15g0848 601 FunFam Carbon catabolite repressor protein 4 1 220 599 - -
Lele15g0848 601 Gene3D Endonuclease/exonuclease/phosphatase 231 600 IPR036691 -
Lele15g0848 601 SUPERFAMILY DNase I-like 246 595 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0848 Lele-ChrLele15 4925097 4930592 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0822 06 5082805 5083793 Lele15g0848 15 4925097 4930592 CCT
Lele07g0996 07 5998847 6000685 Lele15g0848 15 4925097 4930592 CCT
Lele08g0810 08 5093420 5094700 Lele15g0848 15 4925097 4930592 CCT
Lele05g0954 05 5910894 5915187 Lele15g0848 15 4925097 4930592 CCT
Lele13g1575 13 24806679 24819472 Lele15g0848 15 4925097 4930592 hybridization
Lele14g1497 14 23176576 23182320 Lele15g0848 15 4925097 4930592 hybridization