Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0844 ATGAGGGGGCGAAGCTACAGTTACAGTCCCTCACCTCCTAGGGGTTATAGCAGAAGACACCGCAGTCCTAGTCCTCGTGGTCGTTACAGTGGTCGTTATGGAGGCCGTGGTAGGGATTTGCCAACTAGTCTTCTGGTTCGGAACCTTCACAGAGATTGCAGGGTGGAAGATCTACGAGGACCTTTTGGCCATTTTGGTCCTCTCAAGGACATTTACCTACCTCGAGATTATTATACTGGGGAGCCACGTGGATTTGGATTTGTCCAATATGTGGATCCAGCTGATGCTGCAGATGCTAAATATCACATGGACGGTCAAATTCTACTTGGTCGTGAGTTGACTGTGGTGTTTGCTGAGGAAAACAGAAAGAAGCCTGCTGAAATGAGAGCGAGAGAGCGATATAGGAGCCGATCATATAGTAGGAGGTCTCCACATCGCTATTCTTACTCACCACGCTATGCTCGCACCTATTCTCGCAGTCCGCAGTATACACCTTCTCCAAGACGAAGCCGTTATTCCAGGTCAATATCACCAAGGGACCGGAGGTATAGGGAGCGATCATACTCCAGATCACCATATAGGGAGCGATCATACTCCAGATCACCTTATAGGGAGCGATCATATTCAAGAAGTCGTAGTCGAAGTTTATACTAG 654 0.4832 MRGRSYSYSPSPPRGYSRRHRSPSPRGRYSGRYGGRGRDLPTSLLVRNLHRDCRVEDLRGPFGHFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPAEMRARERYRSRSYSRRSPHRYSYSPRYARTYSRSPQYTPSPRRSRYSRSISPRDRRYRERSYSRSPYRERSYSRSPYRERSYSRSRSRSLY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0844 217 MobiDBLite consensus disorder prediction 153 172 - -
Lele15g0844 217 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 44 113 IPR000504 GO:0003723
Lele15g0844 217 SUPERFAMILY RNA-binding domain, RBD 42 147 IPR035979 GO:0003676
Lele15g0844 217 MobiDBLite consensus disorder prediction 124 217 - -
Lele15g0844 217 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 42 209 - -
Lele15g0844 217 SMART rrm1_1 43 116 IPR000504 GO:0003723
Lele15g0844 217 Gene3D - 36 148 IPR012677 -
Lele15g0844 217 MobiDBLite consensus disorder prediction 173 211 - -
Lele15g0844 217 MobiDBLite consensus disorder prediction 1 36 - -
Lele15g0844 217 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 42 120 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0844 Lele-ChrLele15 4906332 4908080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0844 42 151 Eukaryotic Initiation Factors Gene Family AT2G36660 29.091 2.45e-08 51.6