Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0837 ATGATAATGTTATCCTCTGATGTAGTTCTTGCTTTGTTGGTTAATGATGTCTCTTTGGCTGATTATATTGGAGTGGCAGCATCCAAGCATGCAACATATGTTCCTCACACTGCCGGTAGTGGTCCTCGTGAAGATGCAACTCGAATTGGATCTGCTGGTGTTGTGAGGAGACAGGCTGTGGATATCTCACCCCTTCGCCGTGTTAATCAGGCCATATATCTGCTAACTGCTGGTGCTCGTGAATCTGCATTTAGAAATATAAAGACCATTGCTGAATGCTTGGCTGATGAACTTATCAATGCAGCGAAGGGGTCATCCAACAGCTATGCAGTCAACAAAAAGGACGAGATTGAAAGAGTTGCTATGGCAAATCGTTAA 378 0.4392 MIMLSSDVVLALLVNDVSLADYIGVAASKHATYVPHTAGSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTAGARESAFRNIKTIAECLADELINAAKGSSNSYAVNKKDEIERVAMANR 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0837 125 Pfam Ribosomal protein S7p/S5e 40 125 IPR023798 -
Lele15g0837 125 Gene3D Ribosomal protein S7 domain 39 125 IPR036823 -
Lele15g0837 125 SUPERFAMILY Ribosomal protein S7 40 125 IPR036823 -
Lele15g0837 125 PANTHER RIBOSOMAL PROTEIN S7 39 125 IPR000235 GO:0006412
Lele15g0837 125 FunFam Ribosomal protein 75 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0837 Lele-ChrLele15 4853413 4855949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0837 40 125 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 93.023 2.18e-53 165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1510 14 23264391 23269295 Lele15g0837 15 4853413 4855949 hybridization