Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0834 ATGGGTTCTCTTCCTCACGTTGTAGAGGATTGCCTAGGTTTTCTCCAACTCTACAGTGACGGCTCCATTTTCCGATCCGATGACATGGATTTCAATGTTTCACCCGTAGAAGACAACTCTGCCGTCGTTGTGGCTCCTGACTACCGCCTCGCGCCGGAACACCGGCTTCCGGCAGCAGTGGACGATGCGGTGGAAGCCGTGAGGTGGGTGCAGAGGCAGGCTTTGAGTAAGGACGTGGTTGATGGCGGTGGAGATGCATGGCTGATGAATGGTGACGTTGACTTTGACCAAGTGTTTATAGCGGGTGACTCATCTGGCGGGAACATCGCACACCATTTGGCGGTTCGGCTGGGATCCGGATCCCGCGAAATGGATCCGGTTCGGGTACGAGGTTACGTGCTGTTGGCGCCCTTTTTCGGTGGGGAAGTTAGAACCAAGTCCGAGGAGACTGCTCGAGAAAAAATGTTGAGCTTGGACTTACTAGACAGATTTTGGAGACTGTCAGTTCCTGTGGGAGAGAATAGAGATTATCCAATGGCGAACCCATTCGGACCTGCAAGTCCAAACCTTGAACAAGTGATGCTTGACCCTATAATGGTGATAGTGGGAAGCAATGAATTGCTGAAAGATAGAGCACAGGACTATGCAAGAAGATTGAAGGAGCTAGGGAAAAAGATTGAGTACATTGAGTTCGAAGGAAGAGAACATGGGTTTTTCACTCAAGATCCTTTCTCACAAGTTGCAGGAGACGTCATGCAAATCCTCAGACGATTCTTGCTTGAAAATTCTAGTTAG 795 0.4981 MGSLPHVVEDCLGFLQLYSDGSIFRSDDMDFNVSPVEDNSAVVVAPDYRLAPEHRLPAAVDDAVEAVRWVQRQALSKDVVDGGGDAWLMNGDVDFDQVFIAGDSSGGNIAHHLAVRLGSGSREMDPVRVRGYVLLAPFFGGEVRTKSEETAREKMLSLDLLDRFWRLSVPVGENRDYPMANPFGPASPNLEQVMLDPIMVIVGSNELLKDRAQDYARRLKELGKKIEYIEFEGREHGFFTQDPFSQVAGDVMQILRRFLLENSS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0834 264 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 98 110 IPR033140 -
Lele15g0834 264 Gene3D alpha/beta hydrolase 18 263 IPR029058 -
Lele15g0834 264 PANTHER ARYLACETAMIDE DEACETYLASE 40 239 - -
Lele15g0834 264 SUPERFAMILY alpha/beta-Hydrolases 30 259 IPR029058 -
Lele15g0834 264 Coils Coil 205 225 - -
Lele15g0834 264 Pfam alpha/beta hydrolase fold 37 239 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0834 Lele-ChrLele15 4836672 4838551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0834 18 242 Carbohydrate Esterase AT5G16080 36.404 3.22e-44 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0839 06 5207579 5210763 Lele15g0834 15 4836672 4838551 CCT
Lele07g1019 07 6123276 6125530 Lele15g0834 15 4836672 4838551 CCT
Lele08g0828 08 5219802 5223015 Lele15g0834 15 4836672 4838551 CCT
Lele05g1529 05 9811365 9813027 Lele15g0834 15 4836672 4838551 CCT
Lele13g1584 13 24894332 24896222 Lele15g0834 15 4836672 4838551 hybridization
Lele14g1515 14 23291836 23293885 Lele15g0834 15 4836672 4838551 hybridization