Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0832 ATGGATTCGGACGCAGTTCCATTTTCCAGCCAATCGGTAAAATGCTGCGACTGTGGGTGTAGATGTTCTTTGGTAGCCGAATCTCCGGGGGCTTGGATTCGTTCCGTTAAACGAAAGCATGATGAGTTTGAACGGGGCAATCAATTGTTTCTACCGGCCTTGAATTACTTTTCAGTTGCACGGGTCCAAATTGAGAATGAATGTGCTGCATTGCGCGAGATAGTTAGCAGACAACAAAAAACTATACAAGATTTATATGCTGAATTGGAGGAGGAGAGAAATGCTTCATCAACAGCTGCAAACGAGGCCATGTCCATGATATTAAGGTTGCAGAGGGAGAAGGCGGAGATTCAAATGGAAGCCCGGCAGTTCAAGTCTTTTGTGCAGGAGAAGATGTTGCATGATCGGGAGGAAATTCTAGCATTTGAGGATTTGTTGTATAAAAGAGAACAAGCAATCGAGTCACTTACCTGTGAGGTGCAGGCTTATAAGCATAGGATGATGAGCTATGGGCTAACTGAGTCTGAAGCAGATGGTAGGAGTCTGTATATGGAAGATTTTGACCCTGAATATGAACCTTCCATCCGTGAATACCCTCCATTGAAGTGTAATGTAAATGAAATGCATGCTGCGAGGGATGCTGATGATGTAGACGTTGAGAAATATGCATTTGGTGAAACCCCTCGTGATCGATTGAGGAATTTGGAAAGTAGGATCTCTCAAATGGAAGGAAATCCCACATATAGCCAGGTGGATGGGGATATTTCAGGAAGAAATATTCTAGAGAAGGTGATAGTCGGCCAGTCTCCTCGACCAAGTAAACATTCAAGGAAATTTTCTGGTGACTCTAGTACATTTGCTGGAATGGGTAGAGAGATGAGACCTGAATCTTTTGTGGACTCTCCAAAACTTAGTACTTCCTTCCGGAAGATGGATCAGATCTCACTGCCAGAGGAGCCATCCAACTTGAAAAAGGTAGATAATACATCAGAAGCTGGTGATGACACCAGTGATAGAGTTTATACCATTGACTCTATTCATAATGGGCCCCCATCCAATGGTTTTAAAGAGTCCAAACCTGTACCTGGTGTTTATGAAGATTATTCAACCACTCCGAGGGTAGATAATGTTTTTGGATATGAAGACCCTGACATTAAAAAGCTATACATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCGATGAAGCAGACAATCATTTCAATGAGTACTGATAAAGCACAGATGGTGCTATTGAGGGAAATAGCTCAACATTTGTACAAAGAGATGCCACCCCAAAGAAAAATAGCAGTGAATAGGCCATCTGTTGGCAGATTTTCGTCACTTGTTAAGACAATCACAGCTGCTTTTTCTTGGAGGAAGAAAGCACGCCAATGCAAGTATACGTTGGGGCAATCAGCCAACAGCGCGGGCTTGCAAACGCTTCTGGATAATGGGCCTCGTGTAAGGCAATGGAGATGTCTTTCGAGCACACAACTGAGAGTTTATGGGAGCGACTTGGGGGTTTTAGCAACGGTTAGCAAGTCCTTTTATGTTTTCACCAATCATGAAGCCATTTTGAGGAATCTTGTATTGGAAAATCTTAGTGGTGACTTTCGGTACAATGCTTACTACCCTTCATTTGATGTATCAAATATTGCCGTCCAGAATTTCAAAGGGAGAGACTTTTATTCTGATTATCTTTTTCAAATGAGAGAAGAAGGACCATTGTACCTGTTTGATCCAAAGTTTGCTGAAAAAGTTCCAAAGTTGGATTCCCAATTTGACGTTCCTGTTTACTTCCAAGAGGACTTGTTTAGTGTCTTGGGGAAAGAGAGACCAGACTACAGGTGGATTATTGTTGGGCCAGCTGGATCAGGATCATCTTTCCTTGTTGATCCAAATTCGACTTCTGCTTGGAATGCTGTAATCAAGGGCTCCAAGAAGTGGATATTATTTCCTCCTGATGTGATTCCACCAGGAATTCATCCTAGTCCTGATGGTGCAGAGGTTGCATCTCCTGTTTCAATAATTGAGTGGTTTATGAACTTCTATGGTGCGACAAAAAGTTGGAAAAAGAAACCTATTGAGTTCATCTGTAAAGCTGGTGAGGTTGTCTTTGTGCCTATGGATGGTGGCATTTGGTGA 2148 0.4264 MDSDAVPFSSQSVKCCDCGCRCSLVAESPGAWIRSVKRKHDEFERGNQLFLPALNYFSVARVQIENECAALREIVSRQQKTIQDLYAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKSFVQEKMLHDREEILAFEDLLYKREQAIESLTCEVQAYKHRMMSYGLTESEADGRSLYMEDFDPEYEPSIREYPPLKCNVNEMHAARDADDVDVEKYAFGETPRDRLRNLESRISQMEGNPTYSQVDGDISGRNILEKVIVGQSPRPSKHSRKFSGDSSTFAGMGREMRPESFVDSPKLSTSFRKMDQISLPEEPSNLKKVDNTSEAGDDTSDRVYTIDSIHNGPPSNGFKESKPVPGVYEDYSTTPRVDNVFGYEDPDIKKLYMRLQALEADRESMKQTIISMSTDKAQMVLLREIAQHLYKEMPPQRKIAVNRPSVGRFSSLVKTITAAFSWRKKARQCKYTLGQSANSAGLQTLLDNGPRVRQWRCLSSTQLRVYGSDLGVLATVSKSFYVFTNHEAILRNLVLENLSGDFRYNAYYPSFDVSNIAVQNFKGRDFYSDYLFQMREEGPLYLFDPKFAEKVPKLDSQFDVPVYFQEDLFSVLGKERPDYRWIIVGPAGSGSSFLVDPNSTSAWNAVIKGSKKWILFPPDVIPPGIHPSPDGAEVASPVSIIEWFMNFYGATKSWKKKPIEFICKAGEVVFVPMDGGIW 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0832 715 ProSiteProfiles JmjC domain profile. 586 715 IPR003347 -
Lele15g0832 715 Coils Coil 72 120 - -
Lele15g0832 715 Pfam Zein-binding 70 160 IPR007656 -
Lele15g0832 715 Pfam Cupin-like domain 571 709 IPR041667 -
Lele15g0832 715 MobiDBLite consensus disorder prediction 267 302 - -
Lele15g0832 715 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Lele15g0832 715 Coils Coil 385 405 - -
Lele15g0832 715 Gene3D Cupin 537 711 - -
Lele15g0832 715 PANTHER BNAANNG28530D PROTEIN 64 442 - -
Lele15g0832 715 SUPERFAMILY Clavaminate synthase-like 556 709 - -
Lele15g0832 715 MobiDBLite consensus disorder prediction 317 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0832 Lele-ChrLele15 4814094 4819539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0832 564 715 Glycosyltransferase AT1G78280 43.949 2.95e-31 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0980 05 6059887 6062170 Lele15g0832 15 4814094 4819539 CCT
Lele14g1517 14 23306082 23309403 Lele15g0832 15 4814094 4819539 hybridization