Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0829 ATGGGCAACGCCTGTGTGGGACCTAGCCTTGGTGGGAATGGGTTCTTCCAATCGATCACATCCGCTTTCAAGAAAAGCCAGCCGCCGGAGGGCAGGCTTCCAGCGCCTGACGGCGACGAGGACAATAAAAGCACGGAAAATGCTGGGCCTGATTCATCTAAGGATTCTAACGCTCCAAAGCAAGTTCAAAATACACCACCTGAATTGGTGAAAATTCCCAGTGATGAAATAAAGCCGCCACCGCCACCAGAACCCGAAAAGCCTGCTAAACCTGAGGTCAATGAACCTACCGGTAGTACTTCTGGTGCTGGGAAAGATAAGAAGCCTGCCAAGCCGGAGGTGGGGAATGATGAGAAGCCTACTAAGCCGGAGGTGGTGAATGATGAGAAGCCCGCTAAGCCGGATGTGGTCAATGATGAGAAGCCCGCTAAGCCGGATGTGGTCAATGATGAGAAGCCCGCTAAGGCGGAGTTGGTCAATGATGAGAAGCCTGCTAGGACGGAGTTGGTGGTCAATGCCCCTGCTCCTAAGGAACCTGAAAAGCCTGTTAAGCCGGAGGTGGTCAACGAAGCTTCCTCTGGCAATACCGCTGTTGCCGGTGAAGCTACGAAACCTACTCATGTTAAAAGGGCATCGAGCATTGGACTTCGAATACATTCGATAATTGGTGCTTATGAAGATGCTGTAGCTGTTCATGTGGTTATGGAACTCTGTGCTGGTGGAGAGCTTTTTGACAGGATCATACAGAGAGGGCACTACACTGAGAAAAAGGCAGCCGAGCTTGCAAGGGTGATCGTTGGTGTCGTGGAGGCATTCCATTCTATGGGAGTCATGCATCGGGACTTGAAGCCAGAGAACTTTCTGTTCGTCGGCCAAGAGGAAGAGTCACAGCTTAAGACAATAGATTTCGGCCTCTCGGTGTTCTTCAGACCAGGTGAAACATATACCGATGTGGTTGGGAGCCCCTATTATGTGGCCCCTGAAGTTTTGCGGAAGCTCTATGGGTTTGTTAATTACATGCCAATTCCTGATGTTCCTTATTTTGGACCAGAAACGGAGCTAGGCATATTTGACCAAGTTTTAAAAGGAGAACTTGACCTTGTCTCTGAGCCATGGCCTAGCATATCTGCAAGTGCAAAGGACCTTCTTCGAAAAATGCTTACTGAAGGTTTTGCTCTTGATAAACCTCTTGATTCTGTTGTTTTAACTCGTTTGAAGCAATTTGCTGCCAGGAACAAGTTCAAAAAGATGGCCATCCGAGTAATTGCTGAAAGTCTGTCGGAGGATGAAATTGCTGGGTTGAAAGAAATGTTCAAGATGATAGACACAGATAATAGTGGACACATCACTCGTGAGGAACTGAAAGTTGGTTTGGAGAGAGTGGGTGCTTTCCTGAAGGATTCTGAAATTGATCGGTTAATGCAATCGGAGGATCGTCTGTATGCTGCCTTCTCCTATTTTGACAAAGATAATAGTGGCTACATTTCGCGAGACGAGCTCCAGCAAGCGAGTCAAAAGTTTGGTCTAGAAGATGTTCAATTAGACGATATAATCAGCGAAGTTGACCGGGATAATGTAACATATGCTCCTTTCCAATGGTTTCCTATAAATGACTCTGAAAAGGGACTATAG 1632 0.4724 MGNACVGPSLGGNGFFQSITSAFKKSQPPEGRLPAPDGDEDNKSTENAGPDSSKDSNAPKQVQNTPPELVKIPSDEIKPPPPPEPEKPAKPEVNEPTGSTSGAGKDKKPAKPEVGNDEKPTKPEVVNDEKPAKPDVVNDEKPAKPDVVNDEKPAKAELVNDEKPARTELVVNAPAPKEPEKPVKPEVVNEASSGNTAVAGEATKPTHVKRASSIGLRIHSIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTEKKAAELARVIVGVVEAFHSMGVMHRDLKPENFLFVGQEEESQLKTIDFGLSVFFRPGETYTDVVGSPYYVAPEVLRKLYGFVNYMPIPDVPYFGPETELGIFDQVLKGELDLVSEPWPSISASAKDLLRKMLTEGFALDKPLDSVVLTRLKQFAARNKFKKMAIRVIAESLSEDEIAGLKEMFKMIDTDNSGHITREELKVGLERVGAFLKDSEIDRLMQSEDRLYAAFSYFDKDNSGYISRDELQQASQKFGLEDVQLDDIISEVDRDNVTYAPFQWFPINDSEKGL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0829 543 Gene3D Phosphorylase Kinase; domain 1 220 237 - -
Lele15g0829 543 ProSiteProfiles Protein kinase domain profile. 156 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0829 543 MobiDBLite consensus disorder prediction 1 153 - -
Lele15g0829 543 MobiDBLite consensus disorder prediction 106 153 - -
Lele15g0829 543 MobiDBLite consensus disorder prediction 49 68 - -
Lele15g0829 543 PANTHER SERINE/THREONINE-PROTEIN KINASE 218 525 - -
Lele15g0829 543 SUPERFAMILY Protein kinase-like (PK-like) 218 388 IPR011009 -
Lele15g0829 543 SMART serkin_6 185 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0829 543 ProSiteProfiles EF-hand calcium-binding domain profile. 429 464 IPR002048 GO:0005509
Lele15g0829 543 Gene3D - 477 534 - -
Lele15g0829 543 ProSitePatterns EF-hand calcium-binding domain. 442 454 IPR018247 -
Lele15g0829 543 MobiDBLite consensus disorder prediction 34 48 - -
Lele15g0829 543 CDD EFh 434 503 IPR002048 GO:0005509
Lele15g0829 543 Pfam Protein kinase domain 218 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0829 543 Pfam EF hand 434 459 IPR002048 GO:0005509
Lele15g0829 543 Pfam EF-hand domain 480 504 IPR002048 GO:0005509
Lele15g0829 543 Gene3D - 396 476 - -
Lele15g0829 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Lele15g0829 543 SUPERFAMILY EF-hand 426 525 IPR011992 -
Lele15g0829 543 SMART efh_1 479 507 IPR002048 GO:0005509
Lele15g0829 543 SMART efh_1 433 461 IPR002048 GO:0005509
Lele15g0829 543 ProSitePatterns EF-hand calcium-binding domain. 488 500 IPR018247 -
Lele15g0829 543 Gene3D Transferase(Phosphotransferase) domain 1 218 388 - -
Lele15g0829 543 ProSiteProfiles EF-hand calcium-binding domain profile. 475 510 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0829 Lele-ChrLele15 4799610 4803282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0829 1 531 EF-hand Containing Proteins AT2G38910 48.161 1.40e-166 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele15g0829 Pkinase 7.1e-29 CL0016