Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0828 ATGAGCCACAAGCCGCCCTCGCATAACGTTAAAACCCCTTCATTAATACCAAAACAACGCACAAGCTTCTCTCTCTCGAGGTTTTTTCTTCTACTTGGGCCTGAAACGGTGAGAGAGGTGATGATGGAGAAAGCAAATACGTGCGGGGGGCTCGCGAGAACGAAATCTGATCAGCTGGTGGAGGCGCTGAAGTCGCAATCGTCGAGTGAATCGATGGGATTGGTGGAGCAGGCCAGAGCCGGGAGCGGAGCAACGCCGTCGAGGAAATCAAGTAGGCGGATGACAGCTGCATCGCCGGGGAGAAGCGGAGGAGGGAAGAACAACACGCACATAAGGAAGTCGAGGAGCGCTCAGCTGAAGCTTGAGCTGGATGAGGTGAGCAGCGGCGCGGCTCTGAGCCGAGCTTCGAGTGCGAGCTTTGGCCTCTCCTTCTCCTTCACCGGTTTCACTCTTCCTCCCGATGAAATCGCCGACTCCAAGCCCTTCAGCGACGACGATATCCCGGAGGATATTGAAGCTGGAGCTGATAGGCCAAAACTTCAAACAGAACCAACTCTGCCCATTTATCTAAAGTTCAGGGAAGTGAGTTACAAGGTGGTGATCAGAAGCATGACAACAACGGAGGAGAAGGAGATATTGAATGGGATCACTGGTTGCGTCAATCCAGGAGAAGTTCTGGCTTTGATGGGTCCTTCAGGAAGCGGAAAGACCACTCTCCTGAATCTTCTTGGAGGCAGGCTATGTCAGCCCACTGTAAGTGGTTCCATCACTTACAATGACCAACCATATTCCAAGTTCTTGAAGAGCAGGATAGGATTCGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTGAAGGAAACGCTTACATACGCAGCACTCCTGAGACTGCCAAAGACAACCACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATAGGCGGTTCTTTTGTCCGTGGAGTATCTGGTGGAGAAAGGAAGAGAGTTTGTATTGGCAATGAGATCATTATCAACCCTTCTCTTTTGTTTCTCGACGAACCAACTTCTGGTTTGGATTCTACGACAGCCTTGAGAACTGTTCAGATGCTACAAAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAACCATCTAGCAGACTCTTCCACAAATTCGATAAGTTGATCCTTCTAGGAAAAGGCAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGCTTTACTTCCAATCTATAGGATGTTCACCTCTTATTGCCATGAACCCAGCAGAGTTTTTGCTGGACCTTGCCAATGGAAACATAAATGATGTATCTGTACCATCAGAGTTAGATGATAAAGTACAGATGGGAAATGCAGCAACTGAAAACTGGAATGGGAAACCATCACCTGCACTTGTACATGAGTATCTGGTGGAGGCCTATGAGACTCGAGTTGCAGAGACAGAGAAGAAAAAGCTAATGGATCCTATCCCCCTTGATGAAGAAGTGAAGACCAAGGTTTCTTCTCCTAAAAGACAATGGGGTGCGAGCTGGCGTGAGCAATATTCCATACTGTTCTGGAGGGGAATTAAAGAGCGGAGACATGATTATTTTAGCTGGCTGAGAATCACCCAAGTTCTGTCCACTGCAATCATCTTAGGATTACTTTGGTGGCAATCGGATGCCTCCACACCAAAGGGTCTTCAGGATCAGGCAGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGGTTCTTTCCGGTGTTCACTGCAATATTTACCTTTCCTCAAGAGAGAGCCATGCTGAACAAGGAACGTGCAGCTGATATGTACAGACTAAGTGCATACTTCTTAGCTAGGACTACGAGTGACGTTCCATTGGATTTGATATTACCGGTGCTTTTCCTCCTTGTTGTCTATTTCATGGCTGGTTTGAGAGTGAGTGCGGCTCCCTTTTTCCTCAGCATTCTCACTGTTTTCCTCTGCATCGTGGCAGCTCAGGGACTTGGACTTGCCATCGGAGCTACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTTACTGTGATGACCTTCATGCTGGCTGGAGGATTCTTTGTGAAGAAAGTCCCAGTATTTATATCTTGGATTCGGTACATGTCATTCAACTACCACACGTATAAACTTCTATTGAAGGTGCAATATGAACATATAACACCAAGCATAAATGGGATGAGAATTGACAGTGGTTGGACGGAGGTGGGTGCTCTGATAGCCATGGTTTTTGGTTATCGTTTATTGGCTTACCTTTCCTTGCGACGGATGAAACTTCAGTGA 2352 0.4702 MSHKPPSHNVKTPSLIPKQRTSFSLSRFFLLLGPETVREVMMEKANTCGGLARTKSDQLVEALKSQSSSESMGLVEQARAGSGATPSRKSSRRMTAASPGRSGGGKNNTHIRKSRSAQLKLELDEVSSGAALSRASSASFGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAGADRPKLQTEPTLPIYLKFREVSYKVVIRSMTTTEEKEILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLCQPTVSGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIHELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRTVQMLQNIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMLYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELDDKVQMGNAATENWNGKPSPALVHEYLVEAYETRVAETEKKKLMDPIPLDEEVKTKVSSPKRQWGASWREQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDASTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDVPLDLILPVLFLLVVYFMAGLRVSAAPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPVFISWIRYMSFNYHTYKLLLKVQYEHITPSINGMRIDSGWTEVGALIAMVFGYRLLAYLSLRRMKLQ 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0828 783 Gene3D - 189 429 IPR027417 -
Lele15g0828 783 FunFam ABC transporter G family member 22 200 430 - -
Lele15g0828 783 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 190 436 IPR003439 GO:0005524
Lele15g0828 783 Pfam ABC-2 type transporter 393 454 IPR043926 GO:0140359
Lele15g0828 783 SMART AAA_5 222 413 IPR003593 -
Lele15g0828 783 MobiDBLite consensus disorder prediction 62 115 - -
Lele15g0828 783 Pfam ABC-2 type transporter 531 740 IPR013525 GO:0016020|GO:0140359
Lele15g0828 783 ProSitePatterns ABC transporters family signature. 336 350 IPR017871 GO:0005524|GO:0016887
Lele15g0828 783 MobiDBLite consensus disorder prediction 83 114 - -
Lele15g0828 783 CDD ABCG_EPDR 187 418 - -
Lele15g0828 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 425 IPR027417 -
Lele15g0828 783 Pfam ABC transporter 213 364 IPR003439 GO:0005524
Lele15g0828 783 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 127 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0828 Lele-ChrLele15 4788130 4795335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0828 195 450 Calmodulin-binding Proteins AT2G36910 29.389 1.92e-16 82.4