Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0827 ATGCTCAATTCTCCTTTCATCTCCGTTCTCGAGCTTGTGTTTTCTTTCAAGTCTCCCAGCTACACTTCCCAAATGATCAGTTACCATCCTATGATTCAATCTCCGAACTTCAATTCTCAAAAGCTTCCGGCTTTTTTGGAACGCAAGACCCGATCATTTTTGGCGGGTGATTCCCTAAAAGCTTCTCGCTCTGGAGAATTGCGGGCCAGACCCAGAAAAGTAGGATTGAGGGTGTCCTCCAAATTGGCGCCAAATTTCGAACGAGCCATGGAGGTTGAAGGAGTCGGGAGACTGGTGGATAGTAATAAAGAGTTCGATGCGATTGTGATAGGGTCTGGGATTGGAGGCTTAGTTGCAGCGACGCAGTTGGCAGTGAAGGGTGCGAAAGTCTTGGTTTTGGAGAAATACGTGATTCCTGGAGGAAGCTCCGGGTTTTACCAGAGGGATGGTTATACTTTTGATGTTGGCTCTTCTGTCATGTTTGGTTTCAGTGATAAGGGTAATCTCAATTTAATAACACAAGCATTGGCGGCAGTTGGTTGTCAGATGCAGGTGATACCAGATCCAACAACTGTCCATTTCCATCTACCCAATAGTCTTTCTGTTCGAGTGCACAGAGAATATGATAAATTCATTGAAGAACTTGTTAGTTACTTTCCCCATGAAAAGGAGGGTATTGTCAAGTTCTACGGTGAATGCTGGAAGATTTTCAATTCCCTTAATTCACTGGAACTGAAGTCACTCGAGGAGCCACTCTACCTTTTTGGACAATTTTTCCAAAAGCCGCTTGAATGCCTAACTCTAGCGTATTATTTGCCCCAAAATGCTGGAGACACTGCTCGAAAGTACATTCAGGATCCACAATTGTTGTCTTTCATAGATGCAGAGTGTTTCATTGTGAGCACAGTCAACGCGTTGCAGACACCAATGATCAATGCTAGCATGGTTCTCTGTGACAGACATTTTGGTGGAATTAACTACCCTGTTGGGGGTGTTGGTGGGATTGCGAAATCATTAGCAGAAGGTCTGGTTAAACAGGGTAGTGAGATACGTTACAAGGCAAACGTCACTGACATTATAGTGGAGCAGGGAAAAGCAGTAGGTGTTAGGCTTTCAGATGGCAAGAAGTTCTTTGCCAAAACCATAATATCAAATGCTACTAGATGGGATACCTTTGGAAAGCTATTAAAAAGTGAAGCCATTCCAAAAGAAGAGCAAAACTTTCAGAAAATTTATGTCAAAGCTCCTTCTTTTCTTTCAATTCACATGGGAGTTAAAGCTGACGTTCTGCCACCAGATACTGATTGCCATCATTTTGTGCTTGAGAGTGACTGGGCCAGATTGGAGGAGCCATATGGAAGTATATTCTTAAGTATACCGACTGTTCTTGATTCATCATTGGCTCCCGAGGGCCGGCATATTCTTCATATATTCACAACATCTTCCATAGAGGACTGGGAGGGAATTTCAAGAGCAGAATATGAGGCAAAGAAGCAGCTTGTAGCAGATCAAATCATAAGCAGACTAGAGAATAAATTGTTTCCGGGTCTTGGATCTTCCATTGATTTTATGGAGGTAGGGACACCAAAGACACACCGGAGATACCTGGCTCGTGACAAGGGAACCTATGGACCAATGCCACGCAGCATTCCAAAGGGGTTATTGGGAATGCCGTTTAATACCACGGGTGTAGATGGTCTTTACTGTGTTGGTGATAGCTGCTTCCCTGGACAAGGTGTTATTGCAGTTGCTTTTTCAGGAGTTATGTGTGCTCACCGAGTAGCTGCGGATATCGGGCTGGAGAAGAAGTCAGCAGTGTTGGATGCCATGCATCTTCGGTTGCTTGGTTGGTTAAGAACATTGGCATGA 1869 0.4414 MLNSPFISVLELVFSFKSPSYTSQMISYHPMIQSPNFNSQKLPAFLERKTRSFLAGDSLKASRSGELRARPRKVGLRVSSKLAPNFERAMEVEGVGRLVDSNKEFDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCQMQVIPDPTTVHFHLPNSLSVRVHREYDKFIEELVSYFPHEKEGIVKFYGECWKIFNSLNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGDTARKYIQDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAEGLVKQGSEIRYKANVTDIIVEQGKAVGVRLSDGKKFFAKTIISNATRWDTFGKLLKSEAIPKEEQNFQKIYVKAPSFLSIHMGVKADVLPPDTDCHHFVLESDWARLEEPYGSIFLSIPTVLDSSLAPEGRHILHIFTTSSIEDWEGISRAEYEAKKQLVADQIISRLENKLFPGLGSSIDFMEVGTPKTHRRYLARDKGTYGPMPRSIPKGLLGMPFNTTGVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSAVLDAMHLRLLGWLRTLA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0827 622 Gene3D - 108 574 IPR036188 -
Lele15g0827 622 SUPERFAMILY FAD/NAD(P)-binding domain 103 597 IPR036188 -
Lele15g0827 622 PANTHER - 78 611 IPR045892 GO:0016116
Lele15g0827 622 Pfam Flavin containing amine oxidoreductase 114 495 IPR002937 GO:0016491
Lele15g0827 622 TIGRFAM carot_isom: carotene isomerase 105 599 IPR014101 GO:0016117|GO:0046608
Lele15g0827 622 Gene3D - 190 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0827 Lele-ChrLele15 4781396 4785410 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0827 15 4781396 4785410 Lele05g0991 05 6115918 6119504 CCT
Lele15g0827 15 4781396 4785410 Lele06g0849 06 5266205 5270614 CCT
Lele15g0827 15 4781396 4785410 Lele07g1026 07 6169020 6179511 CCT
Lele15g0827 15 4781396 4785410 Lele08g0840 08 5279621 5284273 CCT
Lele13g1591 13 24942514 24947416 Lele15g0827 15 4781396 4785410 hybridization
Lele14g1525 14 23343920 23347862 Lele15g0827 15 4781396 4785410 hybridization