Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0822 ATGTGCGGGAAACACGATTTAAAACAAGTAAGAGTTGAGCAGCGCGACATGGGAAACAACTGTGTCTGTTTTGGATCGAGAACTTCAAAGAATAAAGAAGTTCCCCAGCTTTCGAATTCAACTGGGTGCTGCACTCGATTCCGAAATTTTGTACTTTGCAATAAACGCAAAGCAAATGCGAATGCAACACCAAGTAATAATGAGCCAGATCCCTCAAACACTGTCGCTGACAAGCCTCCAGAGGTAGCCAAAATTGAAAAGGACGACCCAAAATCAGTTCTTGAGAATGCCACCGAAAAGGAACAACAAGTCCCAGACCCTAAAAAACCTTCCGAACCCATAAGGCACGTGGAGGAGCCAAGGGTAGCAGAGCCATCAACTTCAAGAACAACACAGAAAGCAAAATCTGCAGAACCAAAGAAGCCCTACAATGTGAAGAGGCAAGCAGCGGCAGGGCTTAAAGCAGAGGCTGTGTTGCAAACAAGAACAGGAAATCTGAAGGAGTTCTACACTTTGGGAAGGAAGCTTGGGAACGGGCAATTTGGGACTACGTTTCATTGTGTGGAGAAGGACACAGGGAAAGAGTATGCTTGCAAGTCAATAGCCAAGAGGAAATTGATGACAGAGGAAGATTTGGAAGATGTGAGGAGGGAGATTCGGATAATGCATCACTTGGCAGGTTGCCCCGATGTGATATCCATAAAAGGGGCTTATGAAGACGCTGTGGCTGTTCATGTTGTGATGGAGCTATGTGCAGGTGGTGAGTTGTTTGACAGGATTGTGCAGAGAGGGCATTACACTGAAAGACAAGCAGCTCAAATAGCCAGGACTGTAGTTGGCGTCATTGAAGCTTGTCACTCACTTGGAGTAATGCATCGCGATCTTAAACCCGAGAATTTCCTCTTCATTAATGAGAAGGAAGATTCTCCCCTTAAGGCTATCGATTTTGGTTTGTCTGCTTTCTTCAAACCAGGGGATATATTTAATGACGTGGTGGGAAGCCCATACTACGTTGCACCAGAAGTCCTAAAGAAGCGATATGGTCCAGCAGCTGATGTGTGGAGTGCTGGTGTGATCATATTCATTCTGTTAAGTGGGGTGCCTCCGTTTTGGGCGGAAACGGAGCAAGAGATATTTAAGGAGGTATTGCATGGTGAACTTGATTTTAAGTCAGATCCCTGGCCTAGTATATCTGAAAGTGCAAAGGACTTGGTCAGGAAGATGCTCGATAGAGATCCTAGCAAGAGATTGACAGCCCACGAAGCACTTTGTCATCCTTGGATTCGAGTAGATGGATCAGCTCCTGATAAGCCTCTTGACCCTGCAGTTCTGACTCGCCTGAAGCAGTTTTCAGCAATGAACAAGCTCAAAAAAATGGCTCTTAGAATTATTGCAAAGAACCTGTCCGAAGAAGAAATTGCGGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAATAGTGGTCAAATCACTTTTGAAGAACTCAAGGCTGGATTGAAAGCCTTTGGGGCTAACATCGATGAATCCGAGATTCACAATCTAATGCAAGCAGCAGACGTTGACAACAGTGGCACAATAGACTACTCGGAATTCATAGCAGCAACGTTGAATCTCAACAAAGCTGAGAAAGAAGACAACTTAGTGGCTGCTTTCCATTATTTTGACAAAGACGGGAGTGGCTACATCACTCTAGACGAGCTTCAACAAGTTTGTGAAGAACTTGGTGAGGAGAATGCTCACTTGGAGGAGATGATTCTTGAGGCTGATCAAGATAATGATGGCCGAATAGACTACAGCGAATTTGTGGCAATGATGCAGAGAGGCAACGCAGATATGATTAAGAAGGGTGTAAGGGGGAAATAA 1866 0.4469 MCGKHDLKQVRVEQRDMGNNCVCFGSRTSKNKEVPQLSNSTGCCTRFRNFVLCNKRKANANATPSNNEPDPSNTVADKPPEVAKIEKDDPKSVLENATEKEQQVPDPKKPSEPIRHVEEPRVAEPSTSRTTQKAKSAEPKKPYNVKRQAAAGLKAEAVLQTRTGNLKEFYTLGRKLGNGQFGTTFHCVEKDTGKEYACKSIAKRKLMTEEDLEDVRREIRIMHHLAGCPDVISIKGAYEDAVAVHVVMELCAGGELFDRIVQRGHYTERQAAQIARTVVGVIEACHSLGVMHRDLKPENFLFINEKEDSPLKAIDFGLSAFFKPGDIFNDVVGSPYYVAPEVLKKRYGPAADVWSAGVIIFILLSGVPPFWAETEQEIFKEVLHGELDFKSDPWPSISESAKDLVRKMLDRDPSKRLTAHEALCHPWIRVDGSAPDKPLDPAVLTRLKQFSAMNKLKKMALRIIAKNLSEEEIAGLKEMFKMIDTDNSGQITFEELKAGLKAFGANIDESEIHNLMQAADVDNSGTIDYSEFIAATLNLNKAEKEDNLVAAFHYFDKDGSGYITLDELQQVCEELGEENAHLEEMILEADQDNDGRIDYSEFVAMMQRGNADMIKKGVRGK 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0822 621 ProSiteProfiles EF-hand calcium-binding domain profile. 543 578 IPR002048 GO:0005509
Lele15g0822 621 MobiDBLite consensus disorder prediction 59 143 - -
Lele15g0822 621 CDD EFh 476 535 IPR002048 GO:0005509
Lele15g0822 621 SMART efh_1 581 609 IPR002048 GO:0005509
Lele15g0822 621 SMART efh_1 475 503 IPR002048 GO:0005509
Lele15g0822 621 SMART efh_1 511 539 IPR002048 GO:0005509
Lele15g0822 621 SMART efh_1 547 575 IPR002048 GO:0005509
Lele15g0822 621 ProSitePatterns EF-hand calcium-binding domain. 520 532 IPR018247 -
Lele15g0822 621 CDD STKc_CAMK 169 427 - -
Lele15g0822 621 ProSiteProfiles EF-hand calcium-binding domain profile. 580 612 IPR002048 GO:0005509
Lele15g0822 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Lele15g0822 621 MobiDBLite consensus disorder prediction 59 73 - -
Lele15g0822 621 FunFam Calcium-dependent protein kinase 1 172 255 - -
Lele15g0822 621 ProSiteProfiles Protein kinase domain profile. 170 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0822 621 Gene3D - 435 611 - -
Lele15g0822 621 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Lele15g0822 621 MobiDBLite consensus disorder prediction 80 123 - -
Lele15g0822 621 ProSiteProfiles EF-hand calcium-binding domain profile. 507 542 IPR002048 GO:0005509
Lele15g0822 621 Gene3D Phosphorylase Kinase; domain 1 172 255 - -
Lele15g0822 621 ProSitePatterns EF-hand calcium-binding domain. 556 568 IPR018247 -
Lele15g0822 621 Pfam EF-hand domain pair 476 536 IPR002048 GO:0005509
Lele15g0822 621 Pfam EF-hand domain pair 548 607 IPR002048 GO:0005509
Lele15g0822 621 CDD EFh 548 607 IPR002048 GO:0005509
Lele15g0822 621 SUPERFAMILY Protein kinase-like (PK-like) 169 429 IPR011009 -
Lele15g0822 621 ProSitePatterns Protein kinases ATP-binding region signature. 176 203 IPR017441 GO:0005524
Lele15g0822 621 SUPERFAMILY EF-hand 467 608 IPR011992 -
Lele15g0822 621 Gene3D Transferase(Phosphotransferase) domain 1 256 434 - -
Lele15g0822 621 FunFam Calcium-dependent protein kinase SK5 256 440 - -
Lele15g0822 621 Pfam Protein kinase domain 170 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0822 621 ProSitePatterns EF-hand calcium-binding domain. 590 602 IPR018247 -
Lele15g0822 621 FunFam Calcium-dependent protein kinase 1 436 610 - -
Lele15g0822 621 Coils Coil 565 592 - -
Lele15g0822 621 SMART serkin_6 170 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0822 621 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Lele15g0822 621 PANTHER SERINE/THREONINE-PROTEIN KINASE 160 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0822 Lele-ChrLele15 4756803 4759516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0822 80 610 EF-hand Containing Proteins AT3G10660 71.940 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele15g0822 Pkinase 2.4e-73 CL0016