Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0788 ATGCAAAATTGCCATGTATCCTTCCTGTTATCAATAATATTGATCTCATTGCTTCAAGGGCATGGCGGTAACAAGGATTTGCGCCACTACGACTCCGCCAACACAACTACCACCGGCACAACTTTCTCTCCCTACGTCGACTCCTCCCATTTTTCTGACTCTGATAACTACGGGAATGCGTCGAGGTCAGTCGGAGCTTTCGGCAGAGTAGGCGGCGAAGGCGTGGCGGTGGAGAAAGATTCCGACGACCCTTATCAGGATTTTAGGCACTCCATGCTTCAAATGATATTGGAGAATGAGATATACTCCAAGGACGACCTTCGGGAGCTTCTCAATTGTTTTCTTCAGCTCAATTCTCCCTACCACCATGGAGCTATAATCAGAGCTTTCACTGAGATCTGGAATGGCTTCTTGAAGACCAGTTCTCCCAGATTTCACTTCATTCGCAAGTCACGTGACTTCTGA 465 0.4753 MQNCHVSFLLSIILISLLQGHGGNKDLRHYDSANTTTTGTTFSPYVDSSHFSDSDNYGNASRSVGAFGRVGGEGVAVEKDSDDPYQDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGAIIRAFTEIWNGFLKTSSPRFHFIRKSRDF 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0788 154 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 75 135 IPR006458 -
Lele15g0788 154 ProSiteProfiles OVATE domain profile. 77 136 IPR006458 -
Lele15g0788 154 Pfam Transcriptional repressor, ovate 81 135 IPR006458 -
Lele15g0788 154 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 60 138 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0788 Lele-ChrLele15 4532252 4534379 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele15g0788 Ovate 4.8e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1628 13 25185623 25186171 Lele15g0788 15 4532252 4534379 hybridization
Lele14g1562 14 23560701 23561246 Lele15g0788 15 4532252 4534379 hybridization