Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0778 ATGTTCGAGAAGCCATTGACGCCGAGCGACGTGGGGAAGCTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGTACTTCCCGTTGTGGGCGGGAGGGGAGGCGGCCGGAGAGAGTAAGGGCGTGTCGCTGAGTTTCGAGGACGAGGCAGGAAAGTGCTGGAGGTTCCGTTACTCGTACTGGAACAGCAGTCAGAGCTACGTGCTGACCAAAGGCTGGAGTCGTTACGTTAAGGACAAGCGTCTCGATGCTGGCGACGTCGTTTTCTTCCAGCGCCACCGTACCGACTCCAACCGCCTCTTCATCAACTGGAGGCGCCGCCACCAGCCAGGGTCCACCCCCGCGCACGCGTAG 357 0.6134 MFEKPLTPSDVGKLNRLVIPKQHAEKYFPLWAGGEAAGESKGVSLSFEDEAGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVFFQRHRTDSNRLFINWRRRHQPGSTPAHA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0778 118 CDD B3_DNA 1 99 IPR003340 GO:0003677
Lele15g0778 118 SUPERFAMILY DNA-binding pseudobarrel domain 1 110 IPR015300 -
Lele15g0778 118 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 113 IPR044800 GO:0003700
Lele15g0778 118 ProSiteProfiles B3 DNA-binding domain profile. 2 109 IPR003340 GO:0003677
Lele15g0778 118 Gene3D - 1 115 IPR015300 -
Lele15g0778 118 Pfam B3 DNA binding domain 2 108 IPR003340 GO:0003677
Lele15g0778 118 SMART B3_2 2 109 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0778 Lele-ChrLele15 4463896 4464899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0778 1 108 RAV Transcription Factor Family AT3G11580 77.391 6.41e-61 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele15g0778 B3 6.9e-31 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1575 14 23632698 23634250 Lele15g0778 15 4463896 4464899 hybridization