Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0733 ATGGACTTGTATCTGAAGCAATGGAGAAACCAGGATGAGTCAGTGGCAGAGGAACATCATTCTTCAAAGATGCCAAAACTTGTTCTCGAACCTCGTCAAAAGCCTCAATCATCTGCCTCTGTTGCTCTCCCTCTGTTTGTACCCCAACCCAACCCTAAAGTCAGCACCTTGTCAGCATTCTCTGATTCAACCTCCTCTTCTCCCAGACTTCCCCGGATGAGGAGTTATTTCAGCTTGGCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCAGGTACATGTTAGCCGGCGCTGCGGTGCCTCCTGAGCTTCTTCACCCAATCAAGAAAAGCTTTCTTCAATCCCCTTCCTATTTCCTCCAACACTACCCACACTATTACCCAGCCTTAGCATTGCAATCAGGGTATTGGGGAAGGGCAGCCATGGATCCAGAGTCTGGCCGGTGCCGGAGGACTGACGGCAAAAAGTGGCGGTGCTTGAGGGACGTGGTTGCTGGCCAGAAGTACTGCGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAACAACCCACACCAAACGCTTCAGGAGGGTCCCTCGGTGCTCCAATATCCATGACTGCGCCGTCATTGGCAACGGCTTCACTGAGTTCCCCTTTCGATCTCCATCTTGATCAAAGTTCCTTTGGGACCAATAATGAAAACAAGAGCCGGTTTGGAATCCAAGATGATGAGGGTAGTGGGGATGGCAGATATGATCGTCGAGGAGGATGGAGTTCGGCTAATCAAATGGCTTCCGTGGGAGGGCCACCGGCCGAGGCTCTGAGATCATCTGCTTCAACGTCTTCTCCAACTAGTGTTCTACGTCAGTTGCCTCTGCGAACGGCTTCATCGGCACCTTAG 897 0.5195 MDLYLKQWRNQDESVAEEHHSSKMPKLVLEPRQKPQSSASVALPLFVPQPNPKVSTLSAFSDSTSSSPRLPRMRSYFSLAQWQELELQALIFRYMLAGAAVPPELLHPIKKSFLQSPSYFLQHYPHYYPALALQSGYWGRAAMDPESGRCRRTDGKKWRCLRDVVAGQKYCERHMHRGRNRSRKPVEQPTPNASGGSLGAPISMTAPSLATASLSSPFDLHLDQSSFGTNNENKSRFGIQDDEGSGDGRYDRRGGWSSANQMASVGGPPAEALRSSASTSSPTSVLRQLPLRTASSAP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0733 298 Pfam QLQ 77 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele15g0733 298 PANTHER GROWTH-REGULATING FACTOR 5 55 235 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele15g0733 298 MobiDBLite consensus disorder prediction 13 35 - -
Lele15g0733 298 MobiDBLite consensus disorder prediction 225 298 - -
Lele15g0733 298 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele15g0733 298 MobiDBLite consensus disorder prediction 273 298 - -
Lele15g0733 298 MobiDBLite consensus disorder prediction 236 250 - -
Lele15g0733 298 ProSiteProfiles WRC domain profile. 144 188 IPR014977 -
Lele15g0733 298 MobiDBLite consensus disorder prediction 13 27 - -
Lele15g0733 298 MobiDBLite consensus disorder prediction 172 203 - -
Lele15g0733 298 SMART QLQ_2 75 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele15g0733 298 Pfam WRC 145 187 IPR014977 -
Lele15g0733 298 MobiDBLite consensus disorder prediction 185 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0733 Lele-ChrLele15 4235883 4238083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0733 1 190 GRF Transcription Factor Family AT2G36400 61.500 3.95e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele15g0733 WRC 3.8e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1095 05 6808068 6809993 Lele15g0733 15 4235883 4238083 CCT
Lele13g1686 13 25485597 25487317 Lele15g0733 15 4235883 4238083 hybridization
Lele14g1624 14 23867529 23868663 Lele15g0733 15 4235883 4238083 hybridization