Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0727 ATGAGAATGAGACGAGGCGGAGAAGGAGTTACGGAGCTAGTGAGTGCTGATGACTTAGGGAATAATTGGTACAAGTCAAAAGGGCAGGATCCAAGGCATATGAAAGCCCAAACTCGGCTGTCTTCCATTGGTGATCTTACTTTAATCAACACACGTCTCCCTCTTGAGCTACCAAATCGCATGGAAATGGAGGATCATCATCAGCAGCAGCAACAGCAACATCTTGAGTATGGTGCTATGGGGGATCTCCAGCACCTCATGAGTGCACCGAGGTCTCTCTCGGCCGACCTCTTCCCGGTTCACCCCAATTTCACTCCCACCCACCACTACGACACCTTGTCCTTCGGCCGTCATCAACTGATGCCTGATATCATGCCTCGCGGCCTTCACGAGTCTTCTGCTCTTAATACTAGCATTTCTGTGGCCACTCCCGCCGCCGTCACTGCCACTACCCCAACGCTTAGTGCCTTTGAGGCTGACGCTTCCGGTTGTTTCCCCGGAGACGCCTCCACAGCGCGATGGCCCAGACAGGAAACTCTTACACTTCTTGAGATCAGATCTCGTCTTGACTCTAAGTTCAAACACGCCAATCAAAAGGGTCCCTTATGGGATGAACTTTCCAGAATCATGGCAGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAGTTCGAGAACTTGTACAAATATTACAAGAAAACAAAGGAAGGGAAGGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTCCGCCAACTTGAAGCCTTATATGGAGAAAACAACAACCCAACCTCAGTCCAAAATACCAATTTCGGTAACAACAGCCTTCACTTTCAGACCCCGGCCTCCCAAACAAACCAAGACATTTTTAGTAGGCACTGTGATAGCGTCAGCCTCACTAATAACTCCACCGAGTTGGACACATCATCATCGGATGAAAACGATTCAATGGAGAAGAGGAGAAAGAGAAGAGGGAGAAGCTGGAAAGCAAAGATAGAAGAGTTGATTGATTCAGAGATGAAGAAGGTGATAGAGAAGCAAGAGGCATGGTTGGAGAGATTAATGAAGACACTGGAAGAGAACGAAAAGGAGAGGGCGCTGAGAGAGGAAGAATGGAGTAGACAAGAGGCGGCCAGGTTGGATAAGGAGCATAAGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGAGATGCAACTTTAATGGAGGCATTGCAGAAAATAACAGGAAGAGAAATAAAGGCCGGTGATCCAACTACTACTGGTGATGTTCAAAATTACAGCGAAAACCAGAATGAAGACGGAAGTGAAATACTACATAGCTCTGACAGAGTTGGTGAAAGTTGGGCAGAATCTGAGATCACTAATCTCGTTCAGATGAGAGCTGAGGTGGAATCCAGGTTTGGGCAAAGTGGGTGTCCGGAGGAGGTTCTGTGGGAGCAAGTTGCCAACAAAATGGCTTGTTTTGGTCACCATAAGGCAGCTTCTGTGTGCAAAGAGAAGTGGGAAAGTATCAGAAGCTATCACAAGGAGCATAAGCAAAATTCAGCTACTTTTTACTTGCAAACCAGTAACCAGTCACCCCTATGTAATCAAGCAAGTGTTTATTGCTGTGATGTCAACCAACTGCGGCAGGATGGTTCTTCGCCTTCAAATTCTAACGTTGGTAATGCTGCTAGGGCTGATACTTGTTCTCCCTTGTTTATGTGTGAAGCAGAAAAGATGTGGGAAAATTTCGGCTTAAAGTTCAACAAAGGAAACCAAAACCCGTGA 1782 0.4652 MRMRRGGEGVTELVSADDLGNNWYKSKGQDPRHMKAQTRLSSIGDLTLINTRLPLELPNRMEMEDHHQQQQQQHLEYGAMGDLQHLMSAPRSLSADLFPVHPNFTPTHHYDTLSFGRHQLMPDIMPRGLHESSALNTSISVATPAAVTATTPTLSAFEADASGCFPGDASTARWPRQETLTLLEIRSRLDSKFKHANQKGPLWDELSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENNNPTSVQNTNFGNNSLHFQTPASQTNQDIFSRHCDSVSLTNNSTELDTSSSDENDSMEKRRKRRGRSWKAKIEELIDSEMKKVIEKQEAWLERLMKTLEENEKERALREEEWSRQEAARLDKEHKFWAKERAWIEARDATLMEALQKITGREIKAGDPTTTGDVQNYSENQNEDGSEILHSSDRVGESWAESEITNLVQMRAEVESRFGQSGCPEEVLWEQVANKMACFGHHKAASVCKEKWESIRSYHKEHKQNSATFYLQTSNQSPLCNQASVYCCDVNQLRQDGSSPSNSNVGNAARADTCSPLFMCEAEKMWENFGLKFNKGNQNP 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0727 593 Gene3D - 452 514 - -
Lele15g0727 593 Gene3D - 174 236 - -
Lele15g0727 593 ProSiteProfiles Myb-like domain profile. 444 509 IPR001005 -
Lele15g0727 593 Coils Coil 344 374 - -
Lele15g0727 593 FunFam trihelix transcription factor PTL-like 174 236 - -
Lele15g0727 593 PANTHER FI21293P1 161 546 - -
Lele15g0727 593 FunFam Trihelix transcription factor GT-2 452 514 - -
Lele15g0727 593 SMART sant 170 233 IPR001005 -
Lele15g0727 593 SMART sant 448 511 IPR001005 -
Lele15g0727 593 CDD GT1 173 238 - -
Lele15g0727 593 MobiDBLite consensus disorder prediction 303 327 - -
Lele15g0727 593 Pfam Myb/SANT-like DNA-binding domain 451 518 IPR044822 -
Lele15g0727 593 Pfam Myb/SANT-like DNA-binding domain 173 259 IPR044822 -
Lele15g0727 593 CDD GT1 452 514 - -
Lele15g0727 593 ProSiteProfiles Myb-like domain profile. 166 231 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0727 Lele-ChrLele15 4198447 4202993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0727 71 588 Trihelix Transcription Factor Family AT5G03680 41.304 2.08e-126 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele15g0727 Myb_DNA-bind_4 9.1e-19 CL0123