Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0722 ATGCCTACTAGAAGATCCAACTACACTCTCCTGAACCAAATTCCTGATGAAGAGTTCGTTGGCGGTGCAGCCTTGTCCGCAACTTATACTGCTCCCACTTCTTTATTTGATTCTTCATCCGGAGACGGCAAGAACAATAAAAGCAGGCTTGACAGAGGATATGATTGGGACTTGGTTGATGATCATAGTGTCCCTCAGCAGGGGAATCGGATCGGTAATTTATACTCGTCGGTCGGCTTGCAGAGGCAGTCTAGTGGTAGCAGTTTTGGTGAAAGCTCGCTGTCCGGAGAGTATTATGCTCCAACTCTGTCCACGGCAGCTGCAAACGAGATCGATACCTTTGGTTATATGCATGACGATTGGTTCAAGGTTGGAGGTGGTGCTGGTGTGGGAGGCGAGCTACGGAACAAGTTGGTGGAGACTACGGTAAGGATGGGAGGGTCCTATTCGGGTAGAAGCTGGGCGCAGCAGACGGAGGAAAGTTATCAATTGCAGCAGGCTTTGGCACTTAGGCTCTCATCCGAGGCAACATTTGCTGATGATCCAAATTTTCTGGATCCATCACCAGATGAATCTGCTTTAAGGCACGGAAGAGAGTGCGTCAATGGCTGCCTATCTTACTTCGACAAGATTCCGGACGGCTTCTACCTTGTCCACGGGATGGATCCTTATGTGTGGACTGTGTGTACTGATCTACAGGAAAATGGCCGAATTCCATCAATTGAATCACTAAAGTCCGTAGATCCCTGCAATGATTCTTCACTTGAAGTAGTTTTGGTGGATCAACGTAGTGATCCTAACTTAAAGGAGCTGCAAAACAGAGTACGTGGCATTTCTAGTAGCTGCATAACCACAGGAGAGGTTGTAGACCATCTTGCCAAATTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTATTTCCATTTGGAGGGCGTGCAGTAATGATCTAAAAGATTGCTTGGGATCTGTTGTTGTTCCTTTAGGTAGTCTATCTGTTGGCCTCTGTAGGCATCGTTCTATACTGTTCAAAGTGCTAGCTGACACCATTGATTTGCCTTGTCGAGTTGCTAAAGGCTGTAAATACTGTTCAAGAGATGATGCTTCCTCTTGTCTTGTCCAATTTGGGATTGAAAGGGAATATCTGGTTGATTTCTTTGGGAAGCCAGGTTTTTTATGGGAGCCTGATTCCTTGCTCAATGGTCCATCCACCATCTCATTTTCTTCACCGTTGAGCTTTCCAAGACTTAAACCAGCTGAACCTAATATTGATTTCAGGTTATTGGCCAAAGAGTATTTTTCAGATTGTGTGTCTCTTGAGCTTGTCTTTGACAATGATTCTGCAGGAGCTATTGCTGATGGGAATTCTGGATTATCCATTCCAGAACCGTTTGATGGGAAGGGCAGAGGCAGAAATAATGTTAGGTCAAATTCAAATGATAGCAATAAAACTCCTCGCGAGTCTCTGCATTCAGAAGTTTCTCATGTAAGAACTCATGATCAGGGTTCTGAAACATTTGCATCATGCAACGCTCCTCAGAATGTAGACTCTACACCCATGGGCAAGGATCTACCGCCTACTCCTATAGCACTGACAAAGTCAAATGTTGATGCTATTGAGGGTAGCAGGTTTGCTGAAGGAAGTCAACTGGTTCCTAGCAAAACCAGTAGAGAGCTTGGCGTTGATATAGAGTATTTCATCATATCTTGGAGTGATCTTGTTTTAAAAGAGAGAATAGGATCAGGTTCTTTTGGAACAGTACATCGAGCTGAGTGGAATGGCTCGAAGAAAGCAATTGACTACCCACCTGCCATTTCCTGTAATAGGATGGGTAGCTTATACAGGCTGTTACACAAACCTGGTGCCAGAGAGATGTTGGATGAGAGACGTAGACTGAGTATGGCTTATGATGTGCCTGAGTGGATGGCCCCAGAAGTTCTACGAGATGAGCCATCCAATGAAAAGTCAGATGTTTACAGTTTTGGTGTAATCTTGTGGGAGCTGACAACATTGCAACAGCCGTGGAATAATTTGAATCCTGCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGCAAAAGGCTTGAGATTCCACGTGATTTGAATCCCCAAGTAGCTGCAATAATTGAGGCTTGCTGGGCAAGCAAGGATACTCCATCTTTTGTTTACTCCACAAAGAATCGTTTAGGAGATTTAGTTAAAATGGGAAGCAGTGCAACCGACACATACGGCATGTTTTTAGCAATTTTATCGCATGTTGGATTTTTGAGACTTGTCTATGGAGCTTCTGCTTGCATAGTGAAAGTGAAACTTGGTTGGGTGGAAACGCTCAGACAATCCTCTTTGCACCGAGTGGCTGTTGTAGCAGGCTTTTAG 2388 0.4489 MPTRRSNYTLLNQIPDEEFVGGAALSATYTAPTSLFDSSSGDGKNNKSRLDRGYDWDLVDDHSVPQQGNRIGNLYSSVGLQRQSSGSSFGESSLSGEYYAPTLSTAAANEIDTFGYMHDDWFKVGGGAGVGGELRNKLVETTVRMGGSYSGRSWAQQTEESYQLQQALALRLSSEATFADDPNFLDPSPDESALRHGRECVNGCLSYFDKIPDGFYLVHGMDPYVWTVCTDLQENGRIPSIESLKSVDPCNDSSLEVVLVDQRSDPNLKELQNRVRGISSSCITTGEVVDHLAKLVCNRMGGSASVGEDDFISIWRACSNDLKDCLGSVVVPLGSLSVGLCRHRSILFKVLADTIDLPCRVAKGCKYCSRDDASSCLVQFGIEREYLVDFFGKPGFLWEPDSLLNGPSTISFSSPLSFPRLKPAEPNIDFRLLAKEYFSDCVSLELVFDNDSAGAIADGNSGLSIPEPFDGKGRGRNNVRSNSNDSNKTPRESLHSEVSHVRTHDQGSETFASCNAPQNVDSTPMGKDLPPTPIALTKSNVDAIEGSRFAEGSQLVPSKTSRELGVDIEYFIISWSDLVLKERIGSGSFGTVHRAEWNGSKKAIDYPPAISCNRMGSLYRLLHKPGAREMLDERRRLSMAYDVPEWMAPEVLRDEPSNEKSDVYSFGVILWELTTLQQPWNNLNPAQVVAAVGFKGKRLEIPRDLNPQVAAIIEACWASKDTPSFVYSTKNRLGDLVKMGSSATDTYGMFLAILSHVGFLRLVYGASACIVKVKLGWVETLRQSSLHRVAVVAGF 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0722 795 Gene3D Phosphorylase Kinase; domain 1 563 626 - -
Lele15g0722 795 Pfam Protein tyrosine and serine/threonine kinase 644 720 IPR001245 GO:0004672|GO:0006468
Lele15g0722 795 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 644 725 - -
Lele15g0722 795 MobiDBLite consensus disorder prediction 490 504 - -
Lele15g0722 795 Gene3D Transferase(Phosphotransferase) domain 1 627 730 - -
Lele15g0722 795 Pfam Ethylene-responsive protein kinase Le-CTR1 201 397 - -
Lele15g0722 795 SUPERFAMILY Protein kinase-like (PK-like) 569 718 IPR011009 -
Lele15g0722 795 MobiDBLite consensus disorder prediction 459 533 - -
Lele15g0722 795 MobiDBLite consensus disorder prediction 505 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0722 Lele-ChrLele15 4171883 4179143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0722 1 725 MAP Kinase Kinase Kinase AT5G03730 51.001 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele15g0722 EDR1 6.7e-74 CL0125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2664 06 34504455 34514063 Lele15g0722 15 4171883 4179143 CCT
Lele07g2701 07 32523170 32534439 Lele15g0722 15 4171883 4179143 CCT
Lele08g2604 08 31776609 31787200 Lele15g0722 15 4171883 4179143 CCT
Lele15g0722 15 4171883 4179143 Lele05g1988 05 14150661 14154725 CCT
Lele15g0722 15 4171883 4179143 Lele06g1822 06 12786972 12790175 CCT
Lele15g0722 15 4171883 4179143 Lele07g2037 07 13622866 13627718 CCT
Lele15g0722 15 4171883 4179143 Lele08g1827 08 12662664 12665889 CCT
Lele14g1634 14 23930618 23937111 Lele15g0722 15 4171883 4179143 hybridization