Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0713 ATGCATTCTACTAACGTGCTTTTCGAAGAACCTATTAGGATGATCTCTATTATAGAGCCATCCAAACCTAGTTTCTTTCCTGCAATGACAAAAATCGTTGGGACACTTGGTCCCAAATCTCGATCTGTAGAGGTTATTTCTAGTTGCCTCAAGGCTGGAATGTCTGTGGCTCGTTTCGACTTTTCTTGGGGTGATGTGGAGTATCATCAGGAGACTTTGGATAATTTGAAGACCGCTATCAGGAGCACTAAGAAGCTTTGTTCTGTTATGCTGGATACCGTGGGGGCAGAGATGCAAGTTGTTAACAGAAGTGGGACATCTATATCCCTTCAAGCAGATGGTCTTGTTGTTCTTACTCCTGACGAGGGGAAAGAAGCCTCGTCAGAGATACTGCCTATCAATTTTGGTGGACTAGCAAAGTCAGTGAAGAAGGGAGATACTATTTTTGTTGGTCAATACTTGTTCACTGGCAGTGAAACTACTTCTGTATGGCTAGAGGTTACTGAAGTCAAAGGACAAGATGTTGTCTGTGTAATAAAAAACTCAGCAACATTGGCTGGTGCATTGTTCACTTTGCATGCCTCTCAAATTCATATCGATTTGCCCACACTTACTGAGAGAGACAAGGAGGTCATAAGCACTTGGGGAGTGAACAATAAAATTGATTTTTTGTCCTTGTCATACACCCGACATGCAGAAGATGTTCGTGAGGCTCGGGAATTCCTTTCCAAATTAGGTGATCTCAGCCAGACTCAAATTTTGGCAAAGATTGAGAATGTTGAGGGATTGAACCATTTTGATGAGATCCTACAAGAAGCTGATGGAATTATACTTTCCCGTGGGAATCTGGGCATAGATCTTCCACCTGAGAAGGTGTTTTTATTTCAAAAATCTGCTCTTTACAAATGTAATATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACCAACAATTTAAGACCAACTCGTGCAGAAGCCACTGATGTTGCCAATGCTGTTTTGGATGGAAGTGATGCAATTCTTCTTGGTGCTGAGACCCTACGTGGGAATTACCCTGTTGAGACTATTTCTACAGTTGGCCGAATTTGTGCAGAGGCTGAGAAAGTTTTCAACCAAGACCTCTATTTTAAGAAGACAGTCAAATATGTTGGAGAACCAATGACCCACTTGGAATCTATTGCATCCTCTGCGGTACGGGCAGCTATTAAGGTGAGGGCTTCTGTTATTATTTGCTTCACTTCAACTGGAAGGGCTGCAAGATTAATAGCGAAGTATAGGCCTCCCATGCCTGTTCTCTCTGTTGTGATCCCTCAAATTAAGACAAATCAGCTAAAGTGGAGCTTTACTGGAGCCTTTGAGGCAAGACAATCGCTTATAGTGAGAGCTCTCTTTCCCTTGCTTGCTGATCCCCGACACCCTGCGGAGTCAACAGGAGCATCGAATGAGTCAATTCTGAAGGTTGCCCTTGATCATGGAAAAAGGTCAGGGTTTATAAAGGCACACGATCGAGTTGTTGTTTGCCAGAAAGTGGGTGACACATCCGTGGTTAAGATAATTGAGCTTGAAGATTAA 1584 0.4312 MHSTNVLFEEPIRMISIIEPSKPSFFPAMTKIVGTLGPKSRSVEVISSCLKAGMSVARFDFSWGDVEYHQETLDNLKTAIRSTKKLCSVMLDTVGAEMQVVNRSGTSISLQADGLVVLTPDEGKEASSEILPINFGGLAKSVKKGDTIFVGQYLFTGSETTSVWLEVTEVKGQDVVCVIKNSATLAGALFTLHASQIHIDLPTLTERDKEVISTWGVNNKIDFLSLSYTRHAEDVREAREFLSKLGDLSQTQILAKIENVEGLNHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTNNLRPTRAEATDVANAVLDGSDAILLGAETLRGNYPVETISTVGRICAEAEKVFNQDLYFKKTVKYVGEPMTHLESIASSAVRAAIKVRASVIICFTSTGRAARLIAKYRPPMPVLSVVIPQIKTNQLKWSFTGAFEARQSLIVRALFPLLADPRHPAESTGASNESILKVALDHGKRSGFIKAHDRVVVCQKVGDTSVVKIIELED 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0713 527 FunFam Pyruvate kinase 96 202 - -
Lele15g0713 527 FunFam Pyruvate kinase 371 513 - -
Lele15g0713 527 Gene3D - 30 362 IPR040442 -
Lele15g0713 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
Lele15g0713 527 Gene3D - 363 525 IPR036918 -
Lele15g0713 527 PANTHER PYRUVATE KINASE 28 513 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele15g0713 527 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Lele15g0713 527 TIGRFAM pyruv_kin: pyruvate kinase 30 516 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele15g0713 527 SUPERFAMILY PK beta-barrel domain-like 101 186 IPR011037 -
Lele15g0713 527 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele15g0713 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele15g0713 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele15g0713 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele15g0713 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele15g0713 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele15g0713 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele15g0713 527 Pfam Pyruvate kinase, alpha/beta domain 395 523 IPR015795 -
Lele15g0713 527 SUPERFAMILY PK C-terminal domain-like 358 524 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0713 Lele-ChrLele15 4116922 4122457 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0989 06 6143269 6144570 Lele15g0713 15 4116922 4122457 CCT
Lele07g1169 07 7063199 7064653 Lele15g0713 15 4116922 4122457 CCT
Lele08g0977 08 6202803 6204113 Lele15g0713 15 4116922 4122457 CCT
Lele05g1988 05 14150661 14154725 Lele15g0713 15 4116922 4122457 CCT
Lele13g1700 13 25593394 25598942 Lele15g0713 15 4116922 4122457 hybridization
Lele14g1642 14 23989706 23995384 Lele15g0713 15 4116922 4122457 hybridization