Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0710 ATGGCAGACAAGCAAGAGGATCGGACTGAGAGCAGTGATTTCACTTCAGAGGACGAAGGCACCGAGGACTATCGACGGGGAGGCTACCACGCTGTGCGAATCGGCGATACCTTCAAGAATGGTCGCTATGCTGTTCAGAGCAAGCTCGGTTGGGGGCATTTCTCCACCGTCTGGCTCGCCTGGGACATCCAACTTTCTAGATACGTGGCACTGAAAGTTCAAAAGAGCGCTCAGCATTACACAGAAGCAGCCATGGATGAGATAACCATTTTACAACAGATTGCAGATGGAGACCCAGAAGATAAAAAGTGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCAGGTCCCAATGGACAACATGTTTGTATGGCGTTTGAATACCTTGGGGATAATCTCTTAACGCTTATCAAGTATACTGATTACCGAGGATTGCCAATCAACATGGTTAAAGAGATATGCTTTCATATTTTGGTTGGATTAGATTACTTACATAAACAGCTTTCTATAATACATACTGACTTGAAGCCTGAGAACATTCTCCTATTATCAATGATTGATCCATCTAAGGATCCTAGAAGGTCTGGTGCTCCCTTAATTCTACCAAACGCTAAAGATAAAACAGCACTTGAATCGGGAATTGGGAAAGAAGTGAAATCATCAAATGGGGAATTAATGCGGAATCATAAAAAGATTAAAAGGAAAGCTAAGCAGGCAGCTCAGGGATATGTAGAGAAGGAAGCTTCCGAGGAAGTTGTGGGTGATCCTGAGACATCTGGTGCTGTAGAATCTTCTGCAAATGCGATGCCAAATGCAGGTTCTGTTGGAGAACACCCTTCTAGTTCTGCAGGCACCAGTAGGTTGTCAGATGATGACAGGACAGGGGTAAACTGGTCAAAAAACCAGGGTAACAAAAGAGGAAGCCGGTCATTGAGGCAGAAGCTGCTGAAATCAGTTGACCTCAGGTGCAAATTAGTTGACTTTGGCAATGCTTGTTGGACATATAAACAGTTTACAAATGATATTCAAACAAGACAATATCGGTGTCCAGAAGTGATCCTTGGATCAAAATACTCTACGTCAGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGGGATGTACTATTTGATCCTCATAGTGGTGACAATTTTGATAGAGATGAGGACCACTTGGCACTAATGATGGAACTTCTGGGCATGATGCCACGTAAGATTGCACTAGGGGGCCGTTACTCACGTGATTTTTTCAATAGATATGGTGATCTGAGGCACATCCGTCGTTTGCGATTCTGGCCCTTGAGCAAAGTTCTCTTGGAGAAATATGAATTCAATGAGCGAGATGCCAGTGACATGGCCGACTTTTTGGTTCCTATCCTCGACTTTGTTCCTGAGAAACGACCAACAGCCGGTCAGTGCCTTCTGCATCCGTGGATCAATGCCGGTCCCCGCCTTTTGGAGCCATCGGTGCCATCTTCTAACCACAATTCGGCTGCAGATGGTGCTATTTCTGACCAAAAGAAAAGGGACAAGGACGATAGAGAGGCCATGGAGGCAGGGATGGGGAATATTGCCATCAATTCAGATTCTAAACCACACACGGATTTATCAGCGAAAGCCTGTGAAAGCAGTCACAAGTAG 1653 0.4483 MADKQEDRTESSDFTSEDEGTEDYRRGGYHAVRIGDTFKNGRYAVQSKLGWGHFSTVWLAWDIQLSRYVALKVQKSAQHYTEAAMDEITILQQIADGDPEDKKCVVKLLDHFKHSGPNGQHVCMAFEYLGDNLLTLIKYTDYRGLPINMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRRSGAPLILPNAKDKTALESGIGKEVKSSNGELMRNHKKIKRKAKQAAQGYVEKEASEEVVGDPETSGAVESSANAMPNAGSVGEHPSSSAGTSRLSDDDRTGVNWSKNQGNKRGSRSLRQKLLKSVDLRCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLSKVLLEKYEFNERDASDMADFLVPILDFVPEKRPTAGQCLLHPWINAGPRLLEPSVPSSNHNSAADGAISDQKKRDKDDREAMEAGMGNIAINSDSKPHTDLSAKACESSHK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0710 550 MobiDBLite consensus disorder prediction 491 505 - -
Lele15g0710 550 MobiDBLite consensus disorder prediction 490 550 - -
Lele15g0710 550 MobiDBLite consensus disorder prediction 211 309 - -
Lele15g0710 550 MobiDBLite consensus disorder prediction 1 23 - -
Lele15g0710 550 SUPERFAMILY Protein kinase-like (PK-like) 38 495 IPR011009 -
Lele15g0710 550 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 6 509 - -
Lele15g0710 550 Gene3D Phosphorylase Kinase; domain 1 19 125 - -
Lele15g0710 550 MobiDBLite consensus disorder prediction 506 522 - -
Lele15g0710 550 Gene3D Transferase(Phosphotransferase) domain 1 126 484 - -
Lele15g0710 550 ProSiteProfiles Protein kinase domain profile. 43 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0710 550 Pfam Protein kinase domain 43 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0710 550 Pfam Protein kinase domain 320 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0710 550 FunFam CMGC/SRPK protein kinase 29 128 - -
Lele15g0710 550 FunFam Serine/threonine-protein kinase SRPK-like protein 313 483 - -
Lele15g0710 550 MobiDBLite consensus disorder prediction 260 309 - -
Lele15g0710 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Lele15g0710 550 SMART serkin_6 43 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0710 550 CDD STKc_SRPK 32 483 - -
Lele15g0710 550 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0710 Lele-ChrLele15 4094896 4097913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0710 9 535 EF-hand Containing Proteins AT5G22840 66.981 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Lele15g0710 Pkinase 2.4e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1704 13 25616624 25619634 Lele15g0710 15 4094896 4097913 hybridization
Lele14g1646 14 24015916 24018991 Lele15g0710 15 4094896 4097913 hybridization