LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele15g0704	ATGATCACTGAACCAAACATAAGTTCACGTTTCCAATTTAGCTATGTCGTCGTCCTTCTTCTTTTCTTTTTCCTTAGTCATCATTGTACTTGTCAAAAGACTTGCCCAAACTGTGGCTCCTTACAAATTCCATATCCTTTAAGCACAGACCCTAGCTGTGGTGATCCATCCTATAGCCTTCACTGCGATCCCAAATCTAGAAAACTCTACTTTATAACCCTCAATGGAAGTTCCTATTCCGTTCTCAGAGTTATGCCTTCGATCCAACGCTTGTTGGTGCAGCCATCACCTTGGCTTTCTAGGTCATGTGTTACTCAAGATATGCCTGTAAGTGGTGGCCTCTGGTTAAACCAGTCACTTCCTTTCAGAATAACTTCATCCAACACAGTCTTCCTCTTTAACTGCTCGCCTCGCCTATTAGTTTCTCCTCTGAATTGCACTTCCTCTAGTCTTTGTCACCGTTACTTGGAGAGCTCAGGACATGTTGACAGTAAAAGAGCTCTTCAGTGTGCCAGTGGTCTTGGCACTTGTTGCACCTTTGTCGCAGGTGGGATGCCTTCAGCATACAAGATACGCCTTCACAGCTCTGGTTGTAAAGCATTCAGAAGCATCCTTCATTTAGATGCTGAGAAGCCTGCTTCTCTGTGGGAGGAAGGCCTTGAAATTCAATGGGCTTCTCCTCCAGAACCTCTCTGCAGGACACAACAAGATTGCTCTGGAGCTTCTGTCTGTTCCCCAGCTGAAAAAAATGGCGTCTTTCGCTGTCTTTGCAAGGGAGAATACCATTGGGACCCTATGGCTGCAACTTGCTTGAAGAACAAGAAAAAATCTAAATCACATCTCAGCTTAACAGTCCCGATTGTGGTTGTAACATTTTTGTGTGTAGCCACAGTTATGGCCATCATCTTAAGGAGGTCCTGGAAGCTCTCTTACAGGTCGAAGCAGGCCAAGACAATAGAAGATGTGATAAAGTCAAATTCTGGAGAGACACCTGCTAGGATGTTTAAACTGAAGGAGGTGATGAAAATGACAAATGGATTTTCTAAAGACAGAATTTTGGGGAATGGTGGGTTTGGGGAAGTCTATAGAGGTGAACTTCAAGATGGGACAGCTGTGGCCGTGAAGAAAGCTAGATTGGGCAACCTTAAAAGCATCCAACAGATACTAAACGAGGTTGCAATTCTTTCTCAAGTCAATCACAAGAACCTAGTCAGACTCCTAGGTTGCTGTATAGAACCAGAGCAGCCTCTGATGATCTATGAGTACATCTCAAACGGTACCCTCCATGATCATCTTCATGGTAGGTATTCCAACTTCCTAGACTGGAAAACGAGGCTGAATGTTGCTTTTCAAACTGCTGAAGCATTGGCATATCTTCATTCTGCTGCACACACTCCCATTTACCATAGAGATGTGAAGTCCACAAACATACTGCTAGATGATGAATTTAACGCCAAAGTTGCAGATTTTGGGCTCTCCAGATTGGCTAACCCAGGACTCAGTCATGTATCAACCTGTGCTCAGGGAACATTAGGGTACTTGGATCCTGAGTATTACCGCAACTACCAGTTAACTGATAAAAGCGATGTTTATAGTTATGGGGTTGTGTTGCTAGAGCTTTTGACTTCCCAAAAGGCCATAGATTTCTCAAGAGAGCAAGATGATGTAAACCTAGCAATTTTTGTTAGTCAACATGCCAGCAACGGGTCAATCATGGAACTGGTAGATCAGAGGCTCCTAATGTCTAAGGAAACATCTGATGATAAAGTGAAAACAAGCATACAACTTTTCTCAGAGCTAGCACTCAGCTGCCTGAGGGAAAAGAAAAGCGAAAGGCCAAGTATGAAGGACATTGTTCAACACCTTCAATGCATAATTAAAATTGTAGATCAAGTGAGGAATAGTGATGAGGTATCTGTTTAA	1923	0.4321	MITEPNISSRFQFSYVVVLLLFFFLSHHCTCQKTCPNCGSLQIPYPLSTDPSCGDPSYSLHCDPKSRKLYFITLNGSSYSVLRVMPSIQRLLVQPSPWLSRSCVTQDMPVSGGLWLNQSLPFRITSSNTVFLFNCSPRLLVSPLNCTSSSLCHRYLESSGHVDSKRALQCASGLGTCCTFVAGGMPSAYKIRLHSSGCKAFRSILHLDAEKPASLWEEGLEIQWASPPEPLCRTQQDCSGASVCSPAEKNGVFRCLCKGEYHWDPMAATCLKNKKKSKSHLSLTVPIVVVTFLCVATVMAIILRRSWKLSYRSKQAKTIEDVIKSNSGETPARMFKLKEVMKMTNGFSKDRILGNGGFGEVYRGELQDGTAVAVKKARLGNLKSIQQILNEVAILSQVNHKNLVRLLGCCIEPEQPLMIYEYISNGTLHDHLHGRYSNFLDWKTRLNVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVADFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSREQDDVNLAIFVSQHASNGSIMELVDQRLLMSKETSDDKVKTSIQLFSELALSCLREKKSERPSMKDIVQHLQCIIKIVDQVRNSDEVSV	640

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele15g0704	640	Gene3D	Transferase(Phosphotransferase) domain 1	423	638	-	-
	Lele15g0704	640	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	17	628	IPR044652	GO:0004672
	Lele15g0704	640	SMART	serkin_6	347	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele15g0704	640	CDD	STKc_IRAK	353	623	-	-
	Lele15g0704	640	Pfam	Protein kinase domain	348	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele15g0704	640	FunFam	Wall-associated receptor kinase-like 20	423	635	-	-
	Lele15g0704	640	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	467	479	IPR008271	GO:0004672\|GO:0006468
	Lele15g0704	640	ProSitePatterns	Protein kinases ATP-binding region signature.	353	376	IPR017441	GO:0005524
	Lele15g0704	640	ProSiteProfiles	Protein kinase domain profile.	347	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele15g0704	640	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	321	422	-	-
	Lele15g0704	640	Pfam	Wall-associated receptor kinase galacturonan-binding	31	87	IPR025287	GO:0030247
	Lele15g0704	640	Gene3D	Phosphorylase Kinase; domain 1	307	422	-	-
	Lele15g0704	640	SUPERFAMILY	Protein kinase-like (PK-like)	324	623	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele15g0704	Lele-ChrLele15	4065358	4067280	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele15g0704	35	631	Receptor kinase-like Gene Family	AT5G02070	46.720	0.0	533

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Lele15g0704		Pkinase	2.1e-50	CL0016