Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0702 ATGAGGATCCTGCCAGGCTGCCACTACTACAGTTCCGCGTTCTCTCTCGATCCACGCTCAGTCCCCTCCTCGCATGCTGCACACTCCGCTATGGCGGAATCAGCATCTGGTGACTCCTCCACCACCACTGCGCCTCCGGAGAGCAAACCGGTGGTCACCAAGCATAAAAGTTGGGCCGATGAAGTTGAGGAAGAAGTCCCACAAGAAACGAATGCCGCCCCAAGTTCAACATCAGTGTCCTCGCTTAACGTTGACGGATTAGCCATCGACGAGAATAAGAAGACTACTAAGTTCTTGGACGAACCGGAGGACTCCAACATTCAAGCGGTTACTTCTGGTGATACTCCATATACCTCAGCGAGCACCTTTGAAGATTTGAATCTCTCTCCAGAGCTGCTAAAAGGATTGTATGTTGAGATGAAATTTCAGAAGCCTAGCAAAATTCAAGCTATCAGTTTGCCAATGATCTTGAGCCCTCCTTTTAAGGATCTGATTGCACAGGCACATAATGGTTCAGGCAAGACAACATGTTTTGTGCTTGGGATGCTAAGTCGTGTTGACCCCAACCTGAACGATCCTCAAGCTCTTTGCATTTGTCCAACTCGAGAATTAGCTATTCAGAATACGGAAGTTCTTCGAAAGATGGGGAAATACACGGGGATTATTTCAGAATGCGCCATACCCACAGACAGCAGAGATTCCATTCATATTGCAAAACGGGCACCTATTATGGCACAAGTAGTAATTGGGACTCCTGGAACAATTAAGAAGTGGATGTCATATAAGAAACTGAGTGCTTCCAGATTAAGCATTCTTGTCTTCGATGAGGCTGATCAAATGCTTGCAGAGGATGGTTTTAAAGATGATTCTTTGAGGATAATGAAAGATATAGAAAGAGTCAATAATAACTGTCAGGTTCTTCTGTTTTCTGCTACATTTAATGAAATTGTCAAGAATTTTGTTTCAAGAATAGTTGAGAAGGACCACAATCAACTTTTTGTAAAGAAAGAGGAGCTATCTTTAGACGCAGTGAAGCAATACAGGGTGAATTGTCTTGATGAACTCTCTAAAATTGAAGTGATCAAAGATTACATCTTTGAAATAGGAGAGAATGTGGGCCAAACTATCATATTTGTTCGCACAAGAAATAGCGCAAGCATGTTGCACAAAGCGCTCGCTGATTTGGGCTACGAGGTCACTTCTATACAAGGCGCTCTTCAGCATGACGAGAGAGATAAGATTGTCAAAGAGTTCAGAGATGGTTTGACTCAAGTTCTGATATCAACTGATGTTCTTGCCCGAGGCTTTGATCAACAACAGGTTAATTTGGTTATTAATTATGATCTTCCATTGAAACATACTGCGGAGTATTCTCGTGGTCGTGAACAGGAGCCCGATTATGAGGTGTATTTGCATAGGGTTGGGAGGGCTGGACGTTTCGGGCGCAAGGGGGCTGTATTTAACCTTATATGTGGTGAAAGGGATGCAAATCTCATGGCGAAGATTGAGAGGCACTTTGGCACCCATGTATCTGAGGTCCGGGAAAAAAGCGTTGAAGACTATAAAGGAGCTCTTAGGGAGGCGGGTTTATTGCAATGA 1599 0.4396 MRILPGCHYYSSAFSLDPRSVPSSHAAHSAMAESASGDSSTTTAPPESKPVVTKHKSWADEVEEEVPQETNAAPSSTSVSSLNVDGLAIDENKKTTKFLDEPEDSNIQAVTSGDTPYTSASTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILSPPFKDLIAQAHNGSGKTTCFVLGMLSRVDPNLNDPQALCICPTRELAIQNTEVLRKMGKYTGIISECAIPTDSRDSIHIAKRAPIMAQVVIGTPGTIKKWMSYKKLSASRLSILVFDEADQMLAEDGFKDDSLRIMKDIERVNNNCQVLLFSATFNEIVKNFVSRIVEKDHNQLFVKKEELSLDAVKQYRVNCLDELSKIEVIKDYIFEIGENVGQTIIFVRTRNSASMLHKALADLGYEVTSIQGALQHDERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKHTAEYSRGREQEPDYEVYLHRVGRAGRFGRKGAVFNLICGERDANLMAKIERHFGTHVSEVREKSVEDYKGALREAGLLQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0702 532 Gene3D - 341 524 IPR027417 -
Lele15g0702 532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 496 IPR027417 -
Lele15g0702 532 SMART ultradead3 141 347 IPR014001 -
Lele15g0702 532 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 360 522 IPR001650 -
Lele15g0702 532 SMART helicmild6 386 481 IPR001650 -
Lele15g0702 532 Pfam Helicase conserved C-terminal domain 357 481 IPR001650 -
Lele15g0702 532 MobiDBLite consensus disorder prediction 18 84 - -
Lele15g0702 532 CDD SF2_C_DEAD 344 490 - -
Lele15g0702 532 Pfam DEAD/DEAH box helicase 147 319 IPR011545 GO:0003676|GO:0005524
Lele15g0702 532 Gene3D - 100 338 IPR027417 -
Lele15g0702 532 CDD DEADc_DDX19_DDX25 128 332 - -
Lele15g0702 532 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 89 500 - -
Lele15g0702 532 MobiDBLite consensus disorder prediction 69 84 - -
Lele15g0702 532 MobiDBLite consensus disorder prediction 27 48 - -
Lele15g0702 532 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 155 331 IPR014001 -
Lele15g0702 532 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 121 150 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0702 Lele-ChrLele15 4039170 4045177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0702 114 513 Eukaryotic Initiation Factors Gene Family AT1G72730 36.650 2.28e-72 234