Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0699 ATGCGTAGGCAAGTAGCTGACCCGGACACAATGTTGGTCCCTCCATGGCTTGAACCGCTCCTGAACGCATCGTTTTTCAGCGTCTGCCGGATTCACGGAGACGCCGCCCGGAGCGAGTGTAACATGTACTGTCTCGACTGCAATGGCGACCCATTCTGCTTTTATTGCCGTTCTTCAAGGCACAAGGATCATCAAGTTATTCAGATAAGAAGATCTTCGTATCACGATGTAGTGAGAGTTGCGGAAATCCAGCAGGTACTGGATATAAGTGGAGTGCAGACGTATGTGATAAACAGTGCACGAGTGATGTTTCTGAACGAGAGGCCTCAGCCAAAATCGTCGTCGTCGTCTGGGAAAGGAGGAGGAGCTCACATTTGCGAAATTTGTGGAAGAAGCCTCTTGGACCCATTTCGTTTTTGTTCATTGGGATGTAAGCTTTTGGGAATAAAGAGAAATGGGAATGCGAGCTTTGGTTTGGACGGGGCACAGTCAAAGGGATCGGTGTCTTCGAGACAAGAAGAAGAATTGCGTGAAGGGTCACAACAAGATATGTCCCCGGCCACGCCTCCTCCACCACCTGCTTCATCTGCAAGGAGGAGGAAAGGCATTCCTCATAGAGCTCCTTTTGCCTCCTAG 636 0.4984 MRRQVADPDTMLVPPWLEPLLNASFFSVCRIHGDAARSECNMYCLDCNGDPFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQQVLDISGVQTYVINSARVMFLNERPQPKSSSSSGKGGGAHICEICGRSLLDPFRFCSLGCKLLGIKRNGNASFGLDGAQSKGSVSSRQEEELREGSQQDMSPATPPPPPASSARRRKGIPHRAPFAS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0699 211 SUPERFAMILY B-box zinc-binding domain 28 71 - -
Lele15g0699 211 Pfam PLATZ transcription factor 70 146 IPR006734 -
Lele15g0699 211 MobiDBLite consensus disorder prediction 158 211 - -
Lele15g0699 211 Gene3D Classic Zinc Finger 27 72 - -
Lele15g0699 211 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0699 Lele-ChrLele15 4030031 4031612 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele15g0699 PLATZ 1.2e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1717 13 25692508 25694086 Lele15g0699 15 4030031 4031612 hybridization
Lele14g1662 14 24086955 24087976 Lele15g0699 15 4030031 4031612 hybridization