Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0694 ATGTTGCTGTCCTCTAGACAGCTCTCTGTCTCTAAGCAATCTGATACTTCTGAGAAGCGTATCTCTTCACAGATTAAGAGACACTGGAAGAAAAGAACAAAGTTGGTCCTCAAAATTGTCAGTAAAATTGAAGACTGCAAGAACTACTTCAAATTCAATGCGTTTATCTTCACCAAACAAGAGTCACTGGAGGGTCACCAAAAACAGTTGCATAAGTTAGTCTTTAAGGAAGGTGGATTGCCTGATGGAGCCGAAGTAGCTTATTATGCACGTGGACAGAAACTGCTCGAGGGTTACAAAAAGGGCTTTGGAATAATGTGTCGATGCTGCAACTCTGAGGTCAGCCCCTCACAGTTTGAGGTTCATGCAGGCTGGGCTTCCCGCAAGAAACCTTATGCATACATCTACACATCAAATGGGGTGTCTCTCCATGAGTTAGCCATATCTCTTTCAAAAGATCGCAAATACTCTGCAAAGGATAATGATGATTTATGCGTTATTTGTTGGGATGGCGGAGATCTGTTGCTTTGTGATGGATGCCCAAGGGCTTTTCATAAAGAATGTGCATCTCTGTCAAGTATTCCGCGAGGTAATTGGTACTGTAAGGTTTGCCAAAACATGTTCCAAAAAGAAAGATTTGTGGCGCACAATGCCAATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAGCAGATAACCAAGAGATGTGTGCGCATTGTTGAAGATGTTGATGCTGAGCTCAATGGATGTGCTTTATGCAGGGCTTGTGACTTCAGCAAATCAGGATTTGGTCCACGAACAATAATAATTTGTGATCAGTGTGATAAAGAATTTCATGTTGGTTGCTTGAGGGATCATAAAATGTCATTTTTGAAGGAATTGCCAGAAGGGGATTGGTTTTGTTGCCATGATTGCTCAACCATACATTCTACTTTTCAGAGCCTCCTGGTTAGGGGGGCTGAAAAACTTCCAGAACCTCTCTTGGATGTTATAAAGAAGAAGCAAGAGGAAAAAGGTTTAGAATCCCTTAGTGATATTGATGTGAAATGGAGGCTTCTTAAGGGCAAAATTGCTTCTCCTGAAACTAGGCCATTTCTTTTGCAGGCTGTCTCAATCTTTCATGAATGCTTTGATCCTATAGTTGATTCAATTACTGGACGCAATCTTATTACGGCCATGATATATGGAAGGACTGTGCGGAGACAAGAGTTTGGGGCAATGCATTGTGCAATATTAATGGTCAATTCTACTGTGGTATCCGCTGCCTTGCTTCGAATTTTTGGCAGTGATTTGGCGGAACTCCCTCTAGTTGCAACTCGTAGTGTTAACCATGGAAAGGGGTACTTCCAAATACTATACTCGTGCATTGAGAAATTGCTTTCTTCTTTAAACGTCAAGAACCTTGTGTTGCCAGCTACGGCCACCGCAGAGTCCATTTGGATTGAGAAATTTGGGTTCGTAAAGATGACACCAGATGAGCTTTGCAACTACAGAAAGAGCTACCATCAGATGGTGATATTTCAAGGAACATCCATGCTTCATAAAATGCTCACTCCGTGTCCAGATATCAAAAGTTTATCATGA 1593 0.42 MLLSSRQLSVSKQSDTSEKRISSQIKRHWKKRTKLVLKIVSKIEDCKNYFKFNAFIFTKQESLEGHQKQLHKLVFKEGGLPDGAEVAYYARGQKLLEGYKKGFGIMCRCCNSEVSPSQFEVHAGWASRKKPYAYIYTSNGVSLHELAISLSKDRKYSAKDNDDLCVICWDGGDLLLCDGCPRAFHKECASLSSIPRGNWYCKVCQNMFQKERFVAHNANAVAAGRVEGVDPIEQITKRCVRIVEDVDAELNGCALCRACDFSKSGFGPRTIIICDQCDKEFHVGCLRDHKMSFLKELPEGDWFCCHDCSTIHSTFQSLLVRGAEKLPEPLLDVIKKKQEEKGLESLSDIDVKWRLLKGKIASPETRPFLLQAVSIFHECFDPIVDSITGRNLITAMIYGRTVRRQEFGAMHCAILMVNSTVVSAALLRIFGSDLAELPLVATRSVNHGKGYFQILYSCIEKLLSSLNVKNLVLPATATAESIWIEKFGFVKMTPDELCNYRKSYHQMVIFQGTSMLHKMLTPCPDIKSLS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0694 530 Gene3D - 358 519 - -
Lele15g0694 530 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 242 IPR013083 -
Lele15g0694 530 MobiDBLite consensus disorder prediction 1 23 - -
Lele15g0694 530 MobiDBLite consensus disorder prediction 1 18 - -
Lele15g0694 530 Pfam PHD-finger 165 206 IPR019787 -
Lele15g0694 530 ProSiteProfiles Zinc finger PHD-type profile. 253 311 IPR019787 -
Lele15g0694 530 SUPERFAMILY FYVE/PHD zinc finger 246 308 IPR011011 -
Lele15g0694 530 PANTHER AUTOIMMUNE REGULATOR 67 519 - -
Lele15g0694 530 CDD PHD1_AIRE 164 204 - -
Lele15g0694 530 Pfam Tify domain binding domain 98 148 IPR032308 -
Lele15g0694 530 SUPERFAMILY FYVE/PHD zinc finger 151 210 IPR011011 -
Lele15g0694 530 ProSitePatterns Zinc finger PHD-type signature. 165 204 IPR019786 -
Lele15g0694 530 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 311 IPR013083 -
Lele15g0694 530 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 151 228 - -
Lele15g0694 530 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 408 510 IPR016181 -
Lele15g0694 530 ProSiteProfiles Zinc finger PHD-type profile. 162 207 IPR019787 -
Lele15g0694 530 SMART PHD_3 255 309 IPR001965 -
Lele15g0694 530 SMART PHD_3 164 205 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0694 Lele-ChrLele15 3996682 4001462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0694 70 518 PHD Transcription Factor Family AT2G36720 61.693 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele15g0694 TDBD 3.2e-17 No_clan