Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0693 ATGGGTAGGTTGCACCGCAATATTTCCTTGGCATGGCCTCATGGATGTCGTCGTCAAAATGATGAGAATTCAAGTCATTACACGCCACCTTCCCTCGCCACCATCTCTTCCATCATTCCTCAAACTAATTTCAAGCAACCTGCTGTGATCTTTAGTAGTATTATAAAGCTCAGTGGCGCTGAAGACTTTGTCTCTCTAATAACCAGACTCGCGAGGAGGCTTCACAAGGAAAAATGTGACAAGGCCACCTGGGATTCTGATCTTATTTCGGACTATAATGTGAGTCTTGTTTTAACTGTTAGCTTAAAGGGTTGTGGAAATTTTAGCAGCGTACAGAAAGCAGTAAACGCTGTTCCTGAATCGAGGTCTGATAAAACTCTCATCATCGTTGATTATGGCGTATACAGAGAGAAGGTAGTGGTGGAAGCAAACAAAACAAATTTGATACTGCAAGGTCGAGGGTATCTGAACACAATCATAGAATGGAATGATACCGCCAATTCTACAGGAGGGACCTCTAATAGTTACTCAGCTGGAGTCTTTGCTTCTAAGTTTATTGCCTACAACATTAGTCTTAAAAATACGGCTCCTGCACCGTCACCAGGTATGGCGGGAGCGCAGGCAGTGGCGCTAAGAGTGAATGGCGATGAAGCAGCATTCTATGGATGTGGAATGTATAGTGCTCAGGACACTCTCAATGATGATAGTGGAAAGCATTACTTTAAAGAATGCCTTATCCAAGGATCCATTGATTTCATATTTGGGAATGCCAGATCTCTTTTTGAGGATTGTAGCATAAACTCTATAGCAACAGACGAAGGGGACATGATTACTGGGTCCATCACAGCTCAAGCGAGAGAATCGGAGGATGAAGAAAGTGGGTTTTCATTTGTGAATTGTAAGATTGATGGAAGAGGAAAAGTATTGCTTGGAAGAGCTTGGGGAGCATATGCCACTGTGGTCTTCTCCAAAACATATATGTCTGATGTTGTAACACCTGAAGGATGGGATGATTGGAACCTTCCCGCAAGACGCAAGACTGCCTTTTTTGGGGAATATCATTGTCTTGGAAGCGGAGCCAACCACTCGTCCAGAGTCTCATATGGAAGGCAACTTAAAGACTATGAAGCAGCCCGTTTCATGAATGTTTCATATATTGATGGAAATGACTGGCTTCTCAATTATGAAAAATAG 1194 0.4288 MGRLHRNISLAWPHGCRRQNDENSSHYTPPSLATISSIIPQTNFKQPAVIFSSIIKLSGAEDFVSLITRLARRLHKEKCDKATWDSDLISDYNVSLVLTVSLKGCGNFSSVQKAVNAVPESRSDKTLIIVDYGVYREKVVVEANKTNLILQGRGYLNTIIEWNDTANSTGGTSNSYSAGVFASKFIAYNISLKNTAPAPSPGMAGAQAVALRVNGDEAAFYGCGMYSAQDTLNDDSGKHYFKECLIQGSIDFIFGNARSLFEDCSINSIATDEGDMITGSITAQARESEDEESGFSFVNCKIDGRGKVLLGRAWGAYATVVFSKTYMSDVVTPEGWDDWNLPARRKTAFFGEYHCLGSGANHSSRVSYGRQLKDYEAARFMNVSYIDGNDWLLNYEK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0693 397 FunFam Pectinesterase 92 397 - -
Lele15g0693 397 Pfam Pectinesterase 99 389 IPR000070 GO:0030599|GO:0042545
Lele15g0693 397 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 89 392 - -
Lele15g0693 397 ProSitePatterns Pectinesterase signature 2. 246 255 IPR033131 -
Lele15g0693 397 Gene3D - 92 396 IPR012334 -
Lele15g0693 397 SUPERFAMILY Pectin lyase-like 95 392 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0693 Lele-ChrLele15 3992563 3996543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0693 91 392 Carbohydrate Esterase AT1G05310 51.475 3.57e-109 324