Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0667 ATGGGTAGAGCTCCTTGTTGCGACAGGGCAAGTGTAAAGAAAGGGCCATGGTCTCCTGAAGAAGATACCAAGCAAAGGGAGTATATAGAGAAACATGGCACTGGTGGCAACTGGATTACTCTCCCACAAAAAGCTGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTAAGATGGCTTAACTATCTCGGACCCAACATCAAGCACGGCCAGTTCTCTGACGATGAAGACAGAATCATCTGCAGCCTCTTCGCTAGCTTTGGAAGCAGCACTTTCATGGGACTCATTCAGAATCAGTCAGTGTCCATGGTTGGTGGTGAAGCTGCTAGTTGCAGCTCTTCTGATGGAAGCTGA 351 0.4758 MGRAPCCDRASVKKGPWSPEEDTKQREYIEKHGTGGNWITLPQKAGLKRCGKSCRLRWLNYLGPNIKHGQFSDDEDRIICSLFASFGSSTFMGLIQNQSVSMVGGEAASCSSSDGS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0667 116 SUPERFAMILY Homeodomain-like 15 88 IPR009057 -
Lele15g0667 116 SMART sant 13 64 IPR001005 -
Lele15g0667 116 Gene3D - 7 68 - -
Lele15g0667 116 PANTHER OS09G0431300 PROTEIN 1 89 - -
Lele15g0667 116 MobiDBLite consensus disorder prediction 1 23 - -
Lele15g0667 116 FunFam Transcription factor RAX3 7 68 - -
Lele15g0667 116 CDD SANT 16 62 IPR001005 -
Lele15g0667 116 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Lele15g0667 116 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele15g0667 116 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0667 Lele-ChrLele15 3864476 3865343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0667 1 88 MYB Transcription Factor Family AT5G57620 79.545 1.34e-50 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele15g0667 Myb_DNA-binding 6.9e-13 CL0123