Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0662 ATGCCTGCGACTCCACTGCCTTCTTCGTTCCTTATCCTCCAACCGCGCTTCAATTTATACTTCAAACCATTCTTTTATTCCCTCAGCTATCAATCGTCATATCCATCCCTTGCATTCAATTGCACCGGTAGGTTCTCCATCCGCCGGCCTCCATTTCCGTTGAATACTAGACTACACTGTGCCTTGTCACAAGCGCCTCAAGCCGAGTCTCCGAGCGACAATGCGAGTGGCGGTGGCAGGTCTGGTGCTTTATCTCCGGGTCCGCTCACTGGAGATGTGCAGAAAATCGACGTAAATACTCCCAAGGGGACGCGGGATTTCCCGCCCGAAGATATGCGCTTGCGCAACTGGCTTTTCAACAATTTCAAAGAGGTTTCACGGCTGCATGGTTTCGAGGAGGTTGATTTTCCGGTGCTTGAGTCGGAGGCGTTGTTCACTAGGAAGGCAGGGGAGGAGATTAAAGACCAGTTTTATTCACTTTTGATTGCTAGAACTTTGGTAAATGACCCTGATGTTGAAAATCGGGGTAATCGTCGTGTTGCATTGAGGCCTGAATTAACACCTTCGTTGGCAAGGCTGGTAATACAGAAAGGAATGACAAGGGGTCGTCGTCGGGAGCACTACCAATGGAATATGGACATTATTGGCGTTCCTGAGGTTATGGCTGAAGCAGAATTGATATCTTCTATTGTCACTCTGTTCAAGCGGATTGGGATCACAGAATCAGATGTTGGATTTAAGGTTTCCAGCCGAAAGGTGGGAAGCTTCCTTCTTTATCTGAATGATGGGCCCGAAGTATTGAAGTGTTACTCCATTCCTGAAAATTTGTTTGGCAAGATAGAGAAAATTCCGTTGGATGAGATAAAGAAAGAGTTGAAGGCTTCTGGTGTGTCACAAGAGGCTGTTGACGAGCTGTTGCAAACACGTCCAAATAGCCATTTGTGCGTGAGAGTTGGTCATTTGAAGTTCAGAATATGGGTGCAATCCTCTGATGCTTCACATAATGGTTTCAATAAGAAACTTGGAAGCACTGGAGAAGCAGTTGCTGATCTGAAACAGCTGTTTGTCCATGCCGAAAAGTTTGGTTACCATGAATGGCTTCAATTTGATGCATCAGTTGTTCGTGGCCTTGCTTATTACACTGGCATTGTGTTTGAGGGCTTTGACCGAGAAGGAAAGCTGCGAGCTATTTGTGGTGGGGGCAGATATGACCGGTTATTCTCAACTTTTGGCGCTGATGACATTCCTGCTTGTGGCTTTGGGTTTGGTGATGCAGTCATAGTGGAATTGCTTAGAGAGAAGGGTCTTCTACCTGAGCTCAGCTTGCAAATAGAGAACATCGTGTGTGCCCTGGATGTTGCCCTTCAAGGAGCTGCTGCTACGGTTGCTAGGATTCTTAGAGATAAAGGGCAGAGTGTTGACTTGGTTTTGGAGAATAAACCACTTAAATGGGTTTTCAAGCGAGCAAGCCGAATAAATGCTCAGCGGCTGGTATTAGTGGGGAGTTCTGAGTGGCAAAGGGGCATGGTCGGTGTCAAAATTCTCTCTACCGGTGAACATGTAAAACAAGTGATGGGACTTGCACCACATACTCAACTTGATGCCGAATTAGCTGCAGGGATGGGTATGCCAGATAATGGCCCAAAGCTTATGTCTATGTGA 1662 0.4669 MPATPLPSSFLILQPRFNLYFKPFFYSLSYQSSYPSLAFNCTGRFSIRRPPFPLNTRLHCALSQAPQAESPSDNASGGGRSGALSPGPLTGDVQKIDVNTPKGTRDFPPEDMRLRNWLFNNFKEVSRLHGFEEVDFPVLESEALFTRKAGEEIKDQFYSLLIARTLVNDPDVENRGNRRVALRPELTPSLARLVIQKGMTRGRRREHYQWNMDIIGVPEVMAEAELISSIVTLFKRIGITESDVGFKVSSRKVGSFLLYLNDGPEVLKCYSIPENLFGKIEKIPLDEIKKELKASGVSQEAVDELLQTRPNSHLCVRVGHLKFRIWVQSSDASHNGFNKKLGSTGEAVADLKQLFVHAEKFGYHEWLQFDASVVRGLAYYTGIVFEGFDREGKLRAICGGGRYDRLFSTFGADDIPACGFGFGDAVIVELLREKGLLPELSLQIENIVCALDVALQGAAATVARILRDKGQSVDLVLENKPLKWVFKRASRINAQRLVLVGSSEWQRGMVGVKILSTGEHVKQVMGLAPHTQLDAELAAGMGMPDNGPKLMSM 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0662 553 Gene3D Bira Bifunctional Protein; Domain 2 94 435 IPR045864 -
Lele15g0662 553 SUPERFAMILY Class II aaRS ABD-related 447 521 - -
Lele15g0662 553 MobiDBLite consensus disorder prediction 63 107 - -
Lele15g0662 553 Gene3D - 437 528 IPR036621 -
Lele15g0662 553 MobiDBLite consensus disorder prediction 63 79 - -
Lele15g0662 553 SUPERFAMILY Class II aaRS and biotin synthetases 99 435 IPR045864 -
Lele15g0662 553 Pfam Histidyl-tRNA synthetase 344 421 IPR041715 -
Lele15g0662 553 Pfam Histidyl-tRNA synthetase 103 239 IPR041715 -
Lele15g0662 553 CDD HisRS-like_core 111 431 IPR041715 -
Lele15g0662 553 PANTHER HISTIDYL-TRNA SYNTHETASE 95 521 IPR004516 GO:0005737
Lele15g0662 553 FunFam Histidine--tRNA ligase chloroplastic/mitochondrial 437 527 - -
Lele15g0662 553 Pfam Anticodon binding domain 452 521 IPR004154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0662 Lele-ChrLele15 3813530 3820450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0662 515 552 C2H2 Transcription Factor Family AT2G36930 68.293 4.06e-10 57.8