Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0640 ATGTCTTCCTGTGCCGCTTCCTTGGTCCTTCCTACATTCTCCTCAAGGTTCCGGTCACTATGCTTTGCCGGACAAGCCTTGTTCTCTCCCCATTCTGAATCTTTCTCGTCTCTCCGATTAAAATCGAAGCCCATTTCTTTGCCTGCCTCTTTTCTTCCATTCCACACGCCTTCTTCCTCTCGCTTTATCCCCAACGTTGCTCTTTCTTCTGAGTTCGACCAAGAAGAATTGGTGACGGATGAAGACGAGCCTAGCTATTCCCCCGACCTCAAACTCTTCGTGGGTAATCTTCCCTTCAGCGTTGACAGTGCCCAACTTGCTGATTTGTTCGAGAGCGCTGGAACTGTCGAGATGGTTGAGGTAATTTATGATAAAATGACCGGAAGAAGCAGGGGATTTGGTTTTGTGACCATGTCCACCTCTGAGGAAGTTGAAGCTGCCGCTCAACAATTCAATGGCTATGAAATTGATGGGCGGGCATTGAGAGTAAATTTTGGACCTCCTCCTAAGAAGGAGAATGCCCCTTTCAGAGGTTCCAGAGGTGGTTATGCTTCAAATACTGGACACCGTGTTCATGTAGGTAATCTTGCATGGGGTGTTGATAACTTGGCGCTTGAGAATCTGTTTGCTGAGCAGGGAAAGGTTTTGGAAGCCAAGGTAATTTATGACAGAGAGAGTGGAAGGTCAAGAGGATTTGGATTTGTGACTTACGGCAGTGCTGAAGAGGTCAACGGTGCTATTGAGACCTTAGATGGCGTGGACTTGAATGGCAGATCTATTCGAGTGTCATTAGCAGATGCTAAGCCAAGGCGTTCATTTTGA 822 0.472 MSSCAASLVLPTFSSRFRSLCFAGQALFSPHSESFSSLRLKSKPISLPASFLPFHTPSSSRFIPNVALSSEFDQEELVTDEDEPSYSPDLKLFVGNLPFSVDSAQLADLFESAGTVEMVEVIYDKMTGRSRGFGFVTMSTSEEVEAAAQQFNGYEIDGRALRVNFGPPPKKENAPFRGSRGGYASNTGHRVHVGNLAWGVDNLALENLFAEQGKVLEAKVIYDRESGRSRGFGFVTYGSAEEVNGAIETLDGVDLNGRSIRVSLADAKPRRSF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0640 273 Gene3D - 187 273 IPR012677 -
Lele15g0640 273 Gene3D - 69 186 IPR012677 -
Lele15g0640 273 PANTHER OS02G0815200 PROTEIN 46 271 - -
Lele15g0640 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 90 168 IPR000504 GO:0003723
Lele15g0640 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 189 267 IPR000504 GO:0003723
Lele15g0640 273 CDD RRM_HP0827_like 91 168 - -
Lele15g0640 273 SUPERFAMILY RNA-binding domain, RBD 84 188 IPR035979 GO:0003676
Lele15g0640 273 SUPERFAMILY RNA-binding domain, RBD 187 271 IPR035979 GO:0003676
Lele15g0640 273 SMART rrm1_1 91 164 IPR000504 GO:0003723
Lele15g0640 273 SMART rrm1_1 190 263 IPR000504 GO:0003723
Lele15g0640 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 92 162 IPR000504 GO:0003723
Lele15g0640 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 192 261 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0640 Lele-ChrLele15 3722858 3724613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0640 179 272 Eukaryotic Initiation Factors Gene Family AT4G34110 31.959 8.53e-07 48.1