Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0638 ATGGCTTCTGATGGTGAATCAAGAACTGTAAGGTTTCAGGATGATCTTGGGACTGAGTTGAAACCAAGCAAAGGAAGTCCCATGTCAAAGCCGACCTATAAGAAAGAAAGGGGACTTTCGAGGGTCTTCTCTGAGGATTATGATACGGATTATGATACCAAAGAGAAGTTGATATTGGACCCTAGGGGACCAAGAGTGAACAGATGGAACAAGATCTTCCTAGTAGCATGTCTGATTTCTTTGTTTGTGGATCCCTTGTTCTTTTACTTGCCAGTGGCTAAGAAAGACAAGTGCATTGATTTATCCATTCGCCTCGAAGTGTCCCTCACCATAATTCGCTCCATGGTGGATGCATTTTACATATTTCAGATTTATGTTCGCTTTCAAACCGCTTATGTTGCTCCTTCCTCTCGCGTTTTTGGTAGAGGAGAGCTCATCCTTGACCCTTCCAAGATATCATCCCAGTATCTTCAAAGAGACTTCTGGCTTGATGTTGTCGCTGCCCAACCTCTTCCTCAGGTGTTAATATGGCTTGTAATTCCAAATCTCAAGAGTTCACAAATGATTACTTCAAGACATATACTGCGCCTTGCTACCATTTTCCAGTACCTTTTAAGGTTATATCTCATCTTCCCTCTATCATCGCAAATCGTGAAGGCGAAGGGTGTAATGATGGAAAAAGCTTGGGCTGGGGCAGCATATAATCTCATGCTGTATATGCTAGCAAGTCATGTTTTTGGATCGTGCTGGTACCTCTTATCAGTTGAAAGGCAAGAAGAGTGCTGGAAAAAAGTTTGTAGTCTCCAACAACCACACTGCCAGTATCATTATATGGAGTGTAGAAGCGTAGGTGATCCTGAAAGAGTAGCTTGGTTCAGAACAAGCAATGTTTCTGGTCTATGTGATCCCAGCAATAATTTCTTTAAATTTGGCATTTTTGCTGATGCACTGACTTTGGGGATCACGGGCTCCGAGTTCTTCATCAAATACTTTTACTGTTTTTGGTGGGGACTCAGGAATCTCAGCTCTCTGGGACAGAACCTGTTGACAAGCACTCATGTTGCAGAGATTAATTTTGCTGTGATCATAGCAATTCTAGGCCTCGTACTTTTCGCCCAGCTTATAGGCAACATGCAGATGTACATGCAATCAACAACCATGAGGCTGGAAGAATGGAGAATAAGAAGGACAGATACAGAAAGATGGATGCGGCACAGGCAGCTACCTCATGATCTGAAGCAAAACGTTCGACGATACGAGCAATTCAGATGGGTTGCCACACGTGGAGTTGACGAGGAAGTCATTCTCAGAGACCTTCCTGCTGATCTCAGACGCGACATTAAGCGTCACCTCTGCGTCAACCTAGTCCGACATGTACCACTGTTTGATCAGATGGACGAGAGGATGCTGGACGCCATATGCGAAAGGCTGAAGCCATCTCTGTGCACTCCAGCGACAAGGCTAGTTCGTGAAGGTGACCCTGTGAATGAGATGCTCTTCATAGTTCGAGGTCGCTTGGATTCATTCACAACCAATGGTGGCAGAAGTGGCTTCTTCAATTCCTGCAGAATAGGGGCGGGTGATTTCTGTGGCGAAGAGCTCTTGCCCTGGGTTCTGGACCCTCGTCCTAATGCGGTTCTTCCTTCATCAACTCGCACAGTGAAAGCCATAACCCACGTCGAAGCTTTTGCACTCATGGCTGAGGATTTACAGTTCGTGGCAGACCAGTTCCGGAGGCTACACAGTAAACAATTGAGGCACACCTTTAGGTTTTACTCTCAGCAATGGAGGACATGGGCCGCTTGCTTCATACAAGCGGCTTGGTTTAACTATAAGAGGAGAAGAGAGGCCAGCGAGCTCAAGAAGAAGCAGAATTATCACTTGGCTGTGACCTCTGTGCCTCCGAGTTATACCGCCATGAAATATTTCTCTGCACCTCTGCAACCCAACATGGAGTACTCCAATGTTCTCACGAGGCATCCTGTGAGAGGTGGGAGCTTGCGATATGGTTCTGATCTTGACATTCTTGGTTCGTTGAGGAAGCCTGTTGAACCTGACTTCACCGTGGTAGAAGATACATGA 2082 0.4582 MASDGESRTVRFQDDLGTELKPSKGSPMSKPTYKKERGLSRVFSEDYDTDYDTKEKLILDPRGPRVNRWNKIFLVACLISLFVDPLFFYLPVAKKDKCIDLSIRLEVSLTIIRSMVDAFYIFQIYVRFQTAYVAPSSRVFGRGELILDPSKISSQYLQRDFWLDVVAAQPLPQVLIWLVIPNLKSSQMITSRHILRLATIFQYLLRLYLIFPLSSQIVKAKGVMMEKAWAGAAYNLMLYMLASHVFGSCWYLLSVERQEECWKKVCSLQQPHCQYHYMECRSVGDPERVAWFRTSNVSGLCDPSNNFFKFGIFADALTLGITGSEFFIKYFYCFWWGLRNLSSLGQNLLTSTHVAEINFAVIIAILGLVLFAQLIGNMQMYMQSTTMRLEEWRIRRTDTERWMRHRQLPHDLKQNVRRYEQFRWVATRGVDEEVILRDLPADLRRDIKRHLCVNLVRHVPLFDQMDERMLDAICERLKPSLCTPATRLVREGDPVNEMLFIVRGRLDSFTTNGGRSGFFNSCRIGAGDFCGEELLPWVLDPRPNAVLPSSTRTVKAITHVEAFALMAEDLQFVADQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWFNYKRRREASELKKKQNYHLAVTSVPPSYTAMKYFSAPLQPNMEYSNVLTRHPVRGGSLRYGSDLDILGSLRKPVEPDFTVVEDT 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0638 693 SUPERFAMILY Voltage-gated potassium channels 60 383 - -
Lele15g0638 693 Pfam Ion transport protein 69 388 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele15g0638 693 Gene3D Helix hairpin bin 388 452 - -
Lele15g0638 693 MobiDBLite consensus disorder prediction 1 37 - -
Lele15g0638 693 PRINTS EAG/ELK/ERG potassium channel family signature 424 431 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g0638 693 PRINTS EAG/ELK/ERG potassium channel family signature 374 383 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g0638 693 PRINTS EAG/ELK/ERG potassium channel family signature 124 133 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g0638 693 PRINTS EAG/ELK/ERG potassium channel family signature 241 251 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g0638 693 PRINTS EAG/ELK/ERG potassium channel family signature 356 367 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g0638 693 PRINTS EAG/ELK/ERG potassium channel family signature 554 562 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g0638 693 PRINTS EAG/ELK/ERG potassium channel family signature 330 347 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g0638 693 FunFam Cyclic nucleotide-gated ion channel 1 388 452 - -
Lele15g0638 693 Gene3D Jelly Rolls 459 579 IPR014710 -
Lele15g0638 693 Gene3D - 72 385 - -
Lele15g0638 693 ProSiteProfiles cAMP/cGMP binding motif profile. 461 546 IPR000595 -
Lele15g0638 693 SMART cnmp_10 461 592 IPR000595 -
Lele15g0638 693 FunFam Cyclic nucleotide-gated ion channel 1 459 577 - -
Lele15g0638 693 CDD CAP_ED 461 592 IPR000595 -
Lele15g0638 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 39 635 - -
Lele15g0638 693 SUPERFAMILY cAMP-binding domain-like 391 583 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0638 Lele-ChrLele15 3718446 3720972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0638 28 688 Ion Channels AT2G28260 64.350 0.0 891