Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0636 ATGATTACATTTCTGGAGGTGAAGGAGAAATTGAAAGAAGAGGAAAAATGCCTGGATAGTCAACTGTGGCATGCTTGCTCCGGCACGATGGTACAAATGCCGCCGTTGAACTCTAAGGTGTTTTACTTCCCTCAGGGCCACGCCGAGCATGCAAGTGGACCCGTGGATTTCAAGAAATGCCGGTTTCCTCTTCCACCTTGCATTTTATGCAGAGTCGAGTCTGTTAAATACATGGCTGATCCCGAAACAGATGAGGTCTATGCCAAGCTTAAGCTTGTTCCTTTGAATGAGAAGGAGACTTCTTATGATGAGGACGACGGTGTTGGCGGCCGCGCCGATGGATCTGAAGCTCAAGGGAAACTCGCCTCGTTCGCAAAAACTTTGACGCAGTCAGACGCCAACAATGGCGGTGGTTTTTCTGTTCCTAGATACTGCGCAGAGACAATTTTTCCTCGTTTGGACTTTACTGCTGACCCACCTCTTCAGTACATTGAAGCTAAAGATGTCCACGGGAAATCGTGGAAGTTCAAGCACATTTACAGAGGAACACCAAAGCGGCATCTTTTGACCACGGGATGGAGTCCATTTGTGAACAAGAAAAAGCTCGTCGCAGGGGATTCAATAATATTCTTAAGAGGACAAGATGGAGATCTCTATGTAGGGATCCGAAGAGCTAAAAGAGGAAATGGTCGCCGATTTGAGTCCTCATCATCCTTGTGGAATTCAGAGACTGGAAATTCTTCTATACCTTACGAAGGATTCTCGGCCTTGTTGAAGGGAGAAGATAGCAAAAAACTAGCCATCAATAGTGGTACTGGAAATGGAATGATTGGCTCAAAAGTGAGTAGTGTGATGAGCAGTGGGAAACTGAAAGCCGAAGAAGTTATTGAAGCTGCGAATCTTGCTGCTAATGGACAACCCTTTGAGGCTGTGTACTATCCTAGAGCAAGCACACCCGAGTTCTGTGTAAAGGCCTCTTTACTTAAAACAGCCCTGCAAATTAGGTGGTGTTCTGGAATGAGGTTTAAGATGGCTTTTGAAACAGAGGATTCTTCACGGATAAGTTGGTTCATGGGATCTATATCTTCGGTTCAGGTTGCTGATCCTTTACTCTGGCCCGGTTCACCTTGGAGGCTTCTCCAGGTTAAATGGGATGAACCAAATTTACTTCAAAATGTGAAACGAGTAAGCCCATGGTTGGTTGAATTGGTATCCAACATGCCTGTAATCCCTCCACCTTTCTCACCACCAAGGAAGAAAATGAGGTTGCCTCATCAGCATCCAGATGTTCCATTTGATTCTCAGATTTATGCACCCGCGTTTGCTAGCAACCTCTTAGGTCCAATGAACAACCCCTTTGGGTATCATATACCTGAAACCACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTTATTATGGTCTACCCTTATCAGATCTCTACCTCAATAAATTGCAGTCGCCGACTCTATATTTGACTGGTTTTCCCCAACAGCTGGGTCAAGCTTCTATGCAGAACAGGGTCGGTTATAACTCATCAGCGATGCAAAAGCATGGCATGAGTGAGAATGTCATCTCGCAGTTGATTTCCAGTGAAAATTCCGCCCAGTCTTTGAATGAACAGGATGATAATAAGACGCCCCACCTTATGCTTTTTGGGAAAAAAATTCTTCCAGAGAATCAGATCTCCACGAGCTGCTCTCGTGACACGGTCTCCCAAGTTTTCACTCGCCATAGTTCATTATATGGGAACGCTCATAATGGGGCCAATTTTTTTGATGATCTTGTTGGGGGGGGGGGGGAACGGACCAGCTTGCTTTCTAAGAAAAGGACAAAAAGCATAGCCCTTGCGCTTCGATGTGGCCATATTAAGATCGTATAGGGGTTGGTTAAGGATCGGATGTTTCAGAAGGCAAGGGGATGGGCGGCAAGTAGAAGGGTGACACCTATGGAGGACAATCAGAACAAGCAATTTCATCGTCCAAGAGGAAACAGGGAATTCAGCTAA 2007 0.4589 MITFLEVKEKLKEEEKCLDSQLWHACSGTMVQMPPLNSKVFYFPQGHAEHASGPVDFKKCRFPLPPCILCRVESVKYMADPETDEVYAKLKLVPLNEKETSYDEDDGVGGRADGSEAQGKLASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDFTADPPLQYIEAKDVHGKSWKFKHIYRGTPKRHLLTTGWSPFVNKKKLVAGDSIIFLRGQDGDLYVGIRRAKRGNGRRFESSSSLWNSETGNSSIPYEGFSALLKGEDSKKLAINSGTGNGMIGSKVSSVMSSGKLKAEEVIEAANLAANGQPFEAVYYPRASTPEFCVKASLLKTALQIRWCSGMRFKMAFETEDSSRISWFMGSISSVQVADPLLWPGSPWRLLQVKWDEPNLLQNVKRVSPWLVELVSNMPVIPPPFSPPRKKMRLPHQHPDVPFDSQIYAPAFASNLLGPMNNPFGYHIPETTPAGMQGARHAYYGLPLSDLYLNKLQSPTLYLTGFPQQLGQASMQNRVGYNSSAMQKHGMSENVISQLISSENSAQSLNEQDDNKTPHLMLFGKKILPENQISTSCSRDTVSQVFTRHSSLYGNAHNGANFFDDLVGGGGERTSLLSKKRTKSIALALRCGHIKIVXGLVKDRMFQKARGWAASRRVTPMEDNQNKQFHRPRGNREFS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0636 668 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 574 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele15g0636 668 ProSiteProfiles B3 DNA-binding domain profile. 124 226 IPR003340 GO:0003677
Lele15g0636 668 MobiDBLite consensus disorder prediction 652 668 - -
Lele15g0636 668 FunFam Auxin response factor 122 226 - -
Lele15g0636 668 Pfam Auxin response factor 298 381 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele15g0636 668 Pfam B3 DNA binding domain 124 225 IPR003340 GO:0003677
Lele15g0636 668 Gene3D - 121 226 IPR015300 -
Lele15g0636 668 MobiDBLite consensus disorder prediction 646 668 - -
Lele15g0636 668 SMART B3_2 124 226 IPR003340 GO:0003677
Lele15g0636 668 SUPERFAMILY DNA-binding pseudobarrel domain 118 229 IPR015300 -
Lele15g0636 668 CDD B3_DNA 123 224 IPR003340 GO:0003677
Lele15g0636 668 FunFam Auxin response factor 336 409 - -
Lele15g0636 668 Gene3D - 335 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0636 Lele-ChrLele15 3701032 3704070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0636 15 589 B3 DNA Binding Superfamily AT4G30080 54.514 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele15g0636 B3 6e-21 CL0405