Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0631 ATGCTGACTATTGATTGGGTAATGACATCGCGCCAAAGGGGTTATCTTGCTCCGGAATATGCCAGTTCTGGGAAGGTGACAAGAAAATCAGATGTCTACAGCTACGGAATATTACTCCTCGGAATTGTGAGCGGCCTACCGCCGGTTGATCCTTACCAAGATACGGAACGTTTCCTGGTTGAGAAGGCGTGGGCGGCGTACGAAGCTGGGGATTTAACGAAGATGGTGGATGCAGAGCTAAAACAGAGCTTCCCAGAGGAAGAGAGCATGAGATTCCTGAAGGTGGGGCTGCTTTGCGTGCAAGAAACAGCGAAGCTGAGGCCACGAATGACAGAAGTAGTTGAAATGTTGAGCAACAACACTGAAATATTGGCAAATGTGAATATTTCAAAACCAGGGCTTGTGCCTGATCTCAGGGCTATCAGAATCAGAGACGCACCCCATTCAGAGGCTTCAACCTCCAGTGCAGCAACCTATGCAACTTCCTCTTGGAGTTCGGCCAATCTTGGCCGTTAA 516 0.4903 MLTIDWVMTSRQRGYLAPEYASSGKVTRKSDVYSYGILLLGIVSGLPPVDPYQDTERFLVEKAWAAYEAGDLTKMVDAELKQSFPEEESMRFLKVGLLCVQETAKLRPRMTEVVEMLSNNTEILANVNISKPGLVPDLRAIRIRDAPHSEASTSSAATYATSSWSSANLGR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0631 171 SUPERFAMILY Protein kinase-like (PK-like) 13 124 IPR011009 -
Lele15g0631 171 Gene3D Transferase(Phosphotransferase) domain 1 6 131 - -
Lele15g0631 171 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 14 165 - -
Lele15g0631 171 Pfam Protein tyrosine and serine/threonine kinase 15 117 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0631 Lele-ChrLele15 3677435 3678053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0631 14 133 Trihelix Transcription Factor Family AT1G70460 41.732 2.86e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele15g0631 PK_Tyr_Ser-Thr 1e-09 CL0016