Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0624 ATGAGCGTCATCGACATTCTGACCAGAGTCGATTCGATCTGTAAAAAGTACGACAAATACGACATCGACAAGCACAAGGATTCTAATGTTTCTGGCGACGATGCCTTTGCTCGACTATACGCCATCGTCGACGCCGACATCGAGGCTGCTCTTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAAGTAGGGCATCTACCGTGGCGATCAACGCGGAGCTTCGTCGTACCAAGGCTCGGCTGCTGGAGGAGGTCCCCAAGTTGCAGAGGCTGGCGGTCAAAAAGGTAAAGGGGCTTCAACCAGAAGAATTTGCGGCACGTAATGATTTGGTTCTTGCATTGCCAGACAGGATCCAAGCTATACCGGATGGGGCTCCAGGTGCCCCTAAACAAACTGGAGGCTGGGCAGCTTCTGCTTCACGTACTGAAATTAAATTTGATTCAGATGGGCAATTTGACAATGAATACTTCCAGCACACTGAGGAATCAAGTGGATTCAGGCAGGAGTATGAAATGCGTAGGATGAAGCAGGCAAGTGACTTTTTGGTTTTCACAATTGATCAAGGTTTGGAAGTGATCTCAGAAGGATTGGATACATTGAAAAACATGGCACATGATATGAATGAGGAAGTGGATAGACAAGTCCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGATCTTAAGAATACAAATGTTAGACTTAAAGACACGGTCAATCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTGTTGTTGATTATAATTCTGGGAATTGCTGCCTATTTGTACAAAATTGTCGCTAAACTTGGCTCTCTGATTTTCCCATCTGCAGATACTTGTATAACTTTTCCTCATGTTAGCATCAAGGTAGCTGGCGAAGCAGTATTTGTTGGCATTAAGAAGATGCTTTAA 930 0.4484 MSVIDILTRVDSICKKYDKYDIDKHKDSNVSGDDAFARLYAIVDADIEAALQKAETASKEKSRASTVAINAELRRTKARLLEEVPKLQRLAVKKVKGLQPEEFAARNDLVLALPDRIQAIPDGAPGAPKQTGGWAASASRTEIKFDSDGQFDNEYFQHTEESSGFRQEYEMRRMKQASDFLVFTIDQGLEVISEGLDTLKNMAHDMNEEVDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYKIVAKLGSLIFPSADTCITFPHVSIKVAGEAVFVGIKKML 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0624 309 SUPERFAMILY SNARE fusion complex 180 239 - -
Lele15g0624 309 CDD SNARE_Qc 186 239 - -
Lele15g0624 309 Coils Coil 70 90 - -
Lele15g0624 309 FunFam Putative syntaxin-71-like 170 240 - -
Lele15g0624 309 Gene3D - 184 240 - -
Lele15g0624 309 PANTHER SYNTAXIN 45 261 IPR045242 -
Lele15g0624 309 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 179 241 IPR000727 -
Lele15g0624 309 SMART tSNARE_6 174 241 IPR000727 -
Lele15g0624 309 Pfam SNARE domain 216 265 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0624 Lele-ChrLele15 3635422 3638868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0624 1 272 SNARE and Associated Proteins AT3G09740 72.993 1.45e-147 413