Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0622 ATGGTTGTTACCTTTATACTATCTGCCCTATGGCATGTAAGAGCTTATTGTCACATCCTTTATAGCGCTCTTGGTCTTGAATCCAACATCTATGATAACTACTGTCAAGGGACTCAATACCCATCAGGTATTGAACCCCTGCCAGGCGTATCAGTAGTTACTCTTCCTAGCCGTGTCCTACTGTCACATCCAGATTGTCAGTTATTTGAGGGCCTGTCTTTGACTACGGTGTCTATCCTGATATTGCAAGTGACAGCTATGAGTCATAGGCATTTGTATGGCACATCTCAAATGTTTGAGAGTGATCATGACCAAAGTTGGAATTCTATGCATACTGATCAACAGTATGTGCACCTTGGTAGAGCTAGCACTTCAGAGAATGGTTCTTTCGTTTATCCTGTGGAAAATATGCCTATAGATGGCATTTCTTTTGCCTCTAATTGGAATTCTACCACAATGCCAAATGGATTTGCATCCTCAAGTCTCAATATTGAAGTACCACCTCATCAATCCGATGCATCAGGCGCTTCTCATGATCATTTTCTGCATTCATCTAGTGCCTCGCCCTTCTTTGCAGTTTCTGAAAATTATGCCCATCAGCCTTCTTCTTCTTCCAATTATGATAGACAGCCATTTCACGTCGTTGATGGTGGTTTTATTGATCTTACGATGGGAAATGGAAGAGGGCCTCACAAGCGGAAGAGCCCCGGAATTCCTCCAGTCTGTGAGAGAGGTAGTACAAGCAGATACATAAATGCTGAAAGTTCAACCGATCTTCCAATGTCTTCAGAACTACGGCAGGAGAAGCCAAATATGGATTCTCAATATTTGCCTCGGGATCAAGTTACCATGCCACTCACCTTCAGAGGTAGTGGTCTTTCAATCAGGGGTGAGGGTTCCTTGAGAAATGTGAGAAGCCGTTCTGCGCTTGATTTTGAATCCAACCTGGCTAGGACCCATTTATCTGCCGATCATTCACACAACTACTCCACTGGTCTACCCATTGACCATTCTAGCACAATGGATCTCTCAGGTCAGAGCTCTGGCACATTAACAAGGGATTGGAGCCATATGAGCACATCTCATGCTCATGGCAGGGTGCTATTACCAGATGCAAGTGCTCTTAATTGTGAGACAAATCCCTTCCTTGTTGGAAGTGGTGCTAGTAATGCCTGTGTGGATGTTGGGGGTTACCATCATGAATTCAGTACAAGCAGAAATCCTATTGTACCTCAGAGTTTTCATAATAATCTGACTCAGGCTGCTAGGGGAGTGCGAAGCAACTTTTCACAAAGGTCTACTCCACCTTTTAGATCTTCTTCAAGCTTGCGCTTGGGACATGTAGCACCATCAGATAATGGATTGCAAATGGTCGCCGATAATTACTCATCAAGACATCCAAGGTCATTGACAAGCATTGGCTGGCGGAACAGTGACAGAAACGGAAGGTCAAGGATATCTAGTGATAGATATCGACCATTGGCTGATGCACCTAGCCTCCAAGATCGATTTTCTTCAGAGGGTTTCATGATTGTTGATCGTGGGTTGCCATATGGATCTAGAAGTATGGCTGATCAGCATACGGACATGAGGATGGACATAGACAACATGAGCTATGAGGAACTACTTGCCCTTGGAGAGAGGATTGGTCATGTCAACACAGGATTGACTGAGGATTTGGTTTCAAAATGCATGACAGAAACAATATATTGTTCATCTGAGCAAAGTCAGGAGGAAGGAACTTGTGTAATCTGTTTGGAAGAATACAAGAACATGGATGATGTTGGGACGCTGAAAACTTGCCGTCACGACTACCATGTGAGCTGCATTAGAAAGTGGTTATCAATGAAGAACAAATGTCCAATCTGCAAAGCTTCTGCTCTGCCAGATGATAGGAAGGATAAATAA 1908 0.4366 MVVTFILSALWHVRAYCHILYSALGLESNIYDNYCQGTQYPSGIEPLPGVSVVTLPSRVLLSHPDCQLFEGLSLTTVSILILQVTAMSHRHLYGTSQMFESDHDQSWNSMHTDQQYVHLGRASTSENGSFVYPVENMPIDGISFASNWNSTTMPNGFASSSLNIEVPPHQSDASGASHDHFLHSSSASPFFAVSENYAHQPSSSSNYDRQPFHVVDGGFIDLTMGNGRGPHKRKSPGIPPVCERGSTSRYINAESSTDLPMSSELRQEKPNMDSQYLPRDQVTMPLTFRGSGLSIRGEGSLRNVRSRSALDFESNLARTHLSADHSHNYSTGLPIDHSSTMDLSGQSSGTLTRDWSHMSTSHAHGRVLLPDASALNCETNPFLVGSGASNACVDVGGYHHEFSTSRNPIVPQSFHNNLTQAARGVRSNFSQRSTPPFRSSSSLRLGHVAPSDNGLQMVADNYSSRHPRSLTSIGWRNSDRNGRSRISSDRYRPLADAPSLQDRFSSEGFMIVDRGLPYGSRSMADQHTDMRMDIDNMSYEELLALGERIGHVNTGLTEDLVSKCMTETIYCSSEQSQEEGTCVICLEEYKNMDDVGTLKTCRHDYHVSCIRKWLSMKNKCPICKASALPDDRKDK 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0622 635 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 547 628 - -
Lele15g0622 635 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 203 628 IPR045191 GO:0061630
Lele15g0622 635 MobiDBLite consensus disorder prediction 424 445 - -
Lele15g0622 635 Pfam Ring finger domain 581 624 IPR001841 -
Lele15g0622 635 SMART ring_2 582 623 IPR001841 -
Lele15g0622 635 MobiDBLite consensus disorder prediction 462 481 - -
Lele15g0622 635 MobiDBLite consensus disorder prediction 462 492 - -
Lele15g0622 635 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 547 628 IPR013083 -
Lele15g0622 635 ProSiteProfiles Zinc finger RING-type profile. 582 624 IPR001841 -
Lele15g0622 635 SUPERFAMILY RING/U-box 571 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0622 Lele-ChrLele15 3625471 3629484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0622 87 634 C3H Transcription Factor Family AT2G37150 41.176 2.67e-110 340