Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0610 ATGGGGTCACTAGAAAGATCAAAGAAGGGAATTCATCTGTGGAAGAAAGCCATGATTCATTTCTCTCTATGTTTTGTGATGGGATTCTTCACAGGCTTCGCTCCAACAGGTAAATCTTCTTTCGTTTCAACACAAGCTGCTTCTGCTTCCAATGGAACAGAATTTGCGCCACAAGCTATAGAAATGTCTCACGACCAGACAATAAATGTCAATAGAAGTTTGATATCTCCGAGTTCTAGGATCCCCAAACACAAGACAGAGTCGCATGTACAAGAAGAGCCCAGTTTGAAGCCTAGAAAACACATAATCATTGTCACTCCAACGAGCAACAAAATTCCCTTTCAGGCAGTGTTGTTGAGGAGGTTGGCGAATACTATAAAGTTGGTTCCTCAGCCATTGCTGTGGATCGTGGTGGAACCACCAACGGAGTCCATAGAACTTTCGGAGATACTAAGGAAAACAGGAATAATGTACAGACATTTGGTGTCCAAGGAAAACTTCACAGACCTGGAAACCGAGTTGAATCATCAGAGAAATCTTGCTCTCAAGCACATCGAACACCATAAGCTAAGTGGGATTGTTCACTTTGCTGGCCTTTCCAATGCTTATGATCTCGAATTCTTCCACCAACTTAGAGATATTGAGGTATTTGGAACATGGCCAGTGGCGCTATTAGCAGCGAACAGGAAGAAAGTAATAATAGAAGGGCCAGTTTGTGATTCTTCACAAGTCATAGGTTGGCATCTGAAGAATATCAACAATAAGAATGAATCTGTTTCTACCACTCCTCCCATTCACATTTCAAGTTTTGCATTCAATAGTTCCATTCTTTGGGATCCTGAACGGTGGGGTCGCACTTCTTCTGTTCAAGACACATCTCAGAATTCAATCAAAATTGTGAAGCAAGTGGTATTAGAAGATGAATCAAAGTTAAAAGGGATTGCCCCGGAGGGGTGCTCCAGGATCATGCTATGGCGTTTCAATTTTCAACCTCCAAGATATCAAATCTTCACATCTACATCAAATGGTAGCCCCAGATAA 1041 0.4188 MGSLERSKKGIHLWKKAMIHFSLCFVMGFFTGFAPTGKSSFVSTQAASASNGTEFAPQAIEMSHDQTINVNRSLISPSSRIPKHKTESHVQEEPSLKPRKHIIIVTPTSNKIPFQAVLLRRLANTIKLVPQPLLWIVVEPPTESIELSEILRKTGIMYRHLVSKENFTDLETELNHQRNLALKHIEHHKLSGIVHFAGLSNAYDLEFFHQLRDIEVFGTWPVALLAANRKKVIIEGPVCDSSQVIGWHLKNINNKNESVSTTPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKIVKQVVLEDESKLKGIAPEGCSRIMLWRFNFQPPRYQIFTSTSNGSPR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0610 346 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 101 343 IPR029044 -
Lele15g0610 346 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 330 IPR005027 GO:0015018|GO:0016020
Lele15g0610 346 SUPERFAMILY Nucleotide-diphospho-sugar transferases 101 335 IPR029044 -
Lele15g0610 346 FunFam Glycosyltransferases 100 341 - -
Lele15g0610 346 Pfam Glycosyltransferase family 43 122 328 IPR005027 GO:0015018|GO:0016020
Lele15g0610 346 CDD GlcAT-I 102 331 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0610 Lele-ChrLele15 3574850 3576806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0610 1 338 Glycosyltransferase AT2G37090 59.718 6.20e-148 419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1097 06 6822036 6826112 Lele15g0610 15 3574850 3576806 CCT
Lele07g1278 07 7740589 7743343 Lele15g0610 15 3574850 3576806 CCT
Lele08g1084 08 6840740 6842545 Lele15g0610 15 3574850 3576806 CCT
Lele05g1231 05 7704496 7706363 Lele15g0610 15 3574850 3576806 CCT
Lele14g1743 14 24546908 24553098 Lele15g0610 15 3574850 3576806 hybridization