Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0609 ATGGAGTGCAATTATTACTACCAGAAACTGACTGTAGCTTGCAGTTTCACAGTAACTGTTAAGAAAAAGGAAGTAAGAAGATATTTGAGATCTGCCATTTTTGTGGTTCAGTTCAGGAACCAATTGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTCTCAGTCCTGACTCAAAGAAGAGGGAAGACGAGAGATCAAATAAATCAAAGAAGAAATGGTTTGGAAAGCAAAAATTGCAGACTTCAGACTCATACTTGGAAATTGATGATGCACCACCTCTTCCTCCACCCGAAGAGGTCAAATTAACTAATATTGAGAGTGAAAACAATCATGCTCCCGATGTCGAAGTTGCGACTGCTGCAGATACTGAGGAGCCTGTTCCTGCTGTTCAAACAGCCCCTGTTCCAGTTCAAGCTGCTATAATTCCTCAGTCTTCCAGGAAATTAAGTACTGAAGTAGCAGCGATTAAGATTCAAACAGCTTTTCGAGGATACTTGGCCAGAAGAGCATTAAGGGCTTTAAGAGGCTTGGTTAGGTTGAAATCTCTGATGGAAGGGCCAGTTGTAAAACGCCAAGCTGCTAGTACTCTTCGCTCTATGCAGGCTCTAGCTCGTGTGCAATCTCAGATTCGATCTAGGAGGATCAGAATGCTAGAGGAGAATCAAGCTATTCAGAGACAGTTCTTACAGAAGCATGCAAAAGAGCTTAGCCTTCAGATGGGAGATGAATGGGATGACAGCCTGCAATCGAAGGAACAAATTGAAGCCAAGTTACTGAGCAAGTACGAGGCCACAGTGAGGAGAGAAAGGGCACTGGCTTATGCATTTTCTCACCAGCAAAATGGGAAGAATCCATCTAGATCTCTAAACCCTGTATTTATGGATCCAACCAACCCGGCATGGGGTTGGAGCTGGCTGGAGCGATGGATGGCAGCCCGGCCCTGGGAGAGCAAAGATGTGAATGACCAGTCATCGGTCAAAAGCTCGAGCCGCAGCATCACTGGCGGAGAAATAAGTAAATCCTATGCTCGTTACCAGCTCAATTCTGAAAAGCACTCTCCAACGGCCAGCCAAAACCTAGGCTCCCCTAGCTTTCACTCCCACACAACTCCTTCCAAGGCACTTGCTTCTTCAGCATCAGCTGGCAAAAAACTGAAGAAAGTGAGCCCCAAGGAAGCCTCAGTTATCGATGATGACTCTAAAAGCATGGTTAGTGTGCAGTCCAGTTTTCGGAGGCACTCCATTGCTGGATCATCTGTGAGAGATGACGAGAGCCTTGCAGGCTCTCAGGCGGTTCCAAGCTACATGGTGCCAACTCAGTCTGCAAAAGCCAAGTCCAAGACACAGAGTCCATTAACAGTAGAGAATGAAACAGTAGAGAAGGGATCCTCTGTGACAGCGAAGAAACGGCTTTCCTTCCCTCCTTCACCGGCAAGGGCAAGACGGCATTCAGGTCCGCCAAAGGTAGAAAGCAGCTTCAATGCAGAGGTCACCGTCGGTAATGGTGTGGCTGGTTGA 1542 0.4682 MECNYYYQKLTVACSFTVTVKKKEVRRYLRSAIFVVQFRNQLRNAKKMGRKGNWFSTVKKALSPDSKKREDERSNKSKKKWFGKQKLQTSDSYLEIDDAPPLPPPEEVKLTNIESENNHAPDVEVATAADTEEPVPAVQTAPVPVQAAIIPQSSRKLSTEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPVVKRQAASTLRSMQALARVQSQIRSRRIRMLEENQAIQRQFLQKHAKELSLQMGDEWDDSLQSKEQIEAKLLSKYEATVRRERALAYAFSHQQNGKNPSRSLNPVFMDPTNPAWGWSWLERWMAARPWESKDVNDQSSVKSSSRSITGGEISKSYARYQLNSEKHSPTASQNLGSPSFHSHTTPSKALASSASAGKKLKKVSPKEASVIDDDSKSMVSVQSSFRRHSIAGSSVRDDESLAGSQAVPSYMVPTQSAKAKSKTQSPLTVENETVEKGSSVTAKKRLSFPPSPARARRHSGPPKVESSFNAEVTVGNGVAG 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0609 513 MobiDBLite consensus disorder prediction 60 86 - -
Lele15g0609 513 MobiDBLite consensus disorder prediction 357 411 - -
Lele15g0609 513 Gene3D - 92 186 - -
Lele15g0609 513 MobiDBLite consensus disorder prediction 357 385 - -
Lele15g0609 513 ProSiteProfiles IQ motif profile. 159 187 IPR000048 GO:0005515
Lele15g0609 513 PANTHER IQ-DOMAIN 5-RELATED 48 494 - -
Lele15g0609 513 Pfam IQ calmodulin-binding motif 162 180 IPR000048 GO:0005515
Lele15g0609 513 SMART iq_5 158 180 IPR000048 GO:0005515
Lele15g0609 513 MobiDBLite consensus disorder prediction 445 513 - -
Lele15g0609 513 MobiDBLite consensus disorder prediction 62 78 - -
Lele15g0609 513 MobiDBLite consensus disorder prediction 445 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0609 Lele-ChrLele15 3569246 3573009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0609 48 512 IQD Protein Family AT5G03040 53.144 6.43e-142 415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1232 05 7710209 7712937 Lele15g0609 15 3569246 3573009 CCT
Lele13g1798 13 26163096 26171223 Lele15g0609 15 3569246 3573009 hybridization
Lele14g1744 14 24557081 24559516 Lele15g0609 15 3569246 3573009 hybridization