Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0605 ATGTACGGAACTCCTTTAGAGAAGCACATAGTTGGATATGGCTCCTGGGATCCAAGTGGGTTCATGGATGTAGTGGGCGTCTATTTTCCTCAGCAGCTTTTCACAGTGGAACAAAGCTGGCTCGACCTCACGTCTGCTCTCGTCTCTTTCTTTTCTTCTCCGTCGGGCCAAAACCTAACTTCCCAGATACAAAATCATCATGGCAACTTTGCCTTGTCACTTGACTTCCAGCAGTTTCAAAAAGTATGTCATATTGAGGAATTTTATAAAATGTTAGAGGAGAAACCTAAAATCGCTCTCTTGTGCATGAGCGCTGCAGTTCATAAGGTTCTTATCGCCATATGGGAGAGTGACCAACTTCAGGATGGTGCAAAAGTAGACATCCGACTGCATAACTGTCCTGAAATTATGATTGCTCTGAAAAACTTAAAAGCAGCATATATTGAAAAAAGACATAGTATAACATTTGGTGAATTGACAGACAAACTTGTCTCTGTGCGTGGTACTGTTGTGAAGGCCAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGTTTTGAATGCGGAAAGTGCAAACAAAGAATTAGGCGTATATTTCCTGATGGAAAATTTTCACCACCATCAATTTGCAATTTGAATGGCTGCAAGAGCAAAATGTTCAGTCCATTACGATCTACAGCTCAAGCTATAGATTTTCAAAAAATAAGGTTGCAAGAACTCCTAAAACCCGAAGACCATGAAGAAGGACGAGTTCCTCGGACAGTGGAATGTGAGCTTATCCAAGATCTCGTTGATACATGCATACCTGGAGATGTGTTGACTGTTACTGGAATTATAAGAGGAATTAACACGTACATGGATATTGGAGGAGGAAAGTCAAAGAACAGAAGCCAGGGATTTTACTATTTGTATCTCGAAGCTGTTTCCATACAAAATTCTAAGTCACAGCCTACAAATGAGGATTTGCAAGAAATTAATCCCAAAGCAAGACCAGCTGAGCTGCTTGATTTGTTTTCATTTTCTTCCAGGGATTTAGAGTTTATTGTGAAATTTTCAATGGAACATGGCTCAGATTTGTTTCGGCAAATACTTCAATCTATATGCCCATCTATCTATGGGCATGAGCTAGTTAAAGCTGGGATTACGCTTGCATTATTCGGGGGTGTACGAAAACATTCTATGGATCAGAATAAGGTTCCTGTAAGGGGAGACATTCATGTCATAATCGTCGGTGATCCTGGACTAGGCAAGAGCCAATTGCTACAAGCGGCAGCCGCTGTTTCTCCACGAGGCATCTATGTCTGCGGTAATGCGACAACTAAAGCCGGCCTCACAGTAACTGTAGTAAAGGATCCTATGACGAGTGACTATGCTTTTGAGGCCGGTGCTATGGTGCTGGCTGACAGTGGATTGTGCTGTATTGATGAGTTCGATAAAATGTCAGCCGAACATCAGGCACTACTGGAGGCCATGGAACAACAGTGTGTCTCTATTGCAAAGGCAGGATTGGTAGCAAGTTTATCAGCTCGAACTTCTGTCTTAGCCGCGGCAAATCCCGCCGGGGGTCATTATAACCGTGCGAAGACTGTGAATGAAAACTTGAAAATGAGTGCCGCTCTGCTGTCCCGATTTGATTTAGTTTTCATACTGCTGGACAAACCTGATGAACTTCTGGACAAACGAGTCTCGGAGCACATCATGTCACTTCATGCTGGGAATGGACAACTAGCAGTCAAAAAGCAACGTAGAGATTTATCTTCTGATTCAAGAATTACGGTACCACAGAATGCTGAAAGCATAGATTTGGGGGTTAGATCTGGTTCTTTGGTTTCAAAGTTGAGACTTGACCCGCAAAGAGATAGTGATTTTGTTCCCTTGCCTTCTCAACTTCTTCGAAAATACATTGCTTATGCGAGGAGTTTTGTCTTTCCTAGGATGTCCAAGCCCGCAGCAGAAATCCTACAAAAGTTTTATCTTAAGCTGAGAGATCATAATACCTCAGCTGATGGTACACCGATAACAGCAAGGCAACTTGAAAGTCTAGTGAGGCTTGCTGAAGCTCGAGCTCGGCTCGACTTGAGAGAAGAAATAACGGCCCAGGATGCTATGGATGTAGTTGAAATAATGAAGGAATCCCTGTATGATAAATACGTAGATGAGCATGGATTTGTGGATTTTGGACGAAGTGGGGGGATGAGTCAACAGAAAGAGGCGAAACGCTTCCTAAGTGCCCTCAATAAACAATCAGAATTACTGCAGAAAGATTGCTTTTCAATATCTGAAATATATAGTCTGGCGGATAGAATTGGCCTACAAGTCCCTGATGTGGACACTTTCATCGAAAATTTAAACAGCGTTGGTTATCTACTCAAAAAGGGACCAAAGACATACCAGGTGTTATCCTCCTCGCATACACGAAGCCAATCGTCTAGGGTTTTGCAAATGTTTACACAGCTAATCATGGAGCCTTCCATGGAAAGTGATGAGCTTATAATTGAGCACCCGTGCTTAAGTTCTGTATATGTTGAAACTGATACAAGAGTACGGAAACCTGCGCTTGAGTCGAACAACGACTCGTGA 2577 0.4269 MYGTPLEKHIVGYGSWDPSGFMDVVGVYFPQQLFTVEQSWLDLTSALVSFFSSPSGQNLTSQIQNHHGNFALSLDFQQFQKVCHIEEFYKMLEEKPKIALLCMSAAVHKVLIAIWESDQLQDGAKVDIRLHNCPEIMIALKNLKAAYIEKRHSITFGELTDKLVSVRGTVVKASTVRPLVVEMSFECGKCKQRIRRIFPDGKFSPPSICNLNGCKSKMFSPLRSTAQAIDFQKIRLQELLKPEDHEEGRVPRTVECELIQDLVDTCIPGDVLTVTGIIRGINTYMDIGGGKSKNRSQGFYYLYLEAVSIQNSKSQPTNEDLQEINPKARPAELLDLFSFSSRDLEFIVKFSMEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVTVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSAEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPAGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRVSEHIMSLHAGNGQLAVKKQRRDLSSDSRITVPQNAESIDLGVRSGSLVSKLRLDPQRDSDFVPLPSQLLRKYIAYARSFVFPRMSKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLREEITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRFLSALNKQSELLQKDCFSISEIYSLADRIGLQVPDVDTFIENLNSVGYLLKKGPKTYQVLSSSHTRSQSSRVLQMFTQLIMEPSMESDELIIEHPCLSSVYVETDTRVRKPALESNNDS 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0605 858 Gene3D - 179 229 - -
Lele15g0605 858 SMART mcm 152 713 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele15g0605 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 401 416 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele15g0605 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 461 475 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele15g0605 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 512 524 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele15g0605 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 488 501 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele15g0605 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 539 547 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele15g0605 858 SUPERFAMILY Nucleic acid-binding proteins 62 282 IPR012340 -
Lele15g0605 858 Gene3D - 160 281 IPR012340 -
Lele15g0605 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 718 IPR027417 -
Lele15g0605 858 Pfam MCM AAA-lid domain 629 712 IPR041562 -
Lele15g0605 858 SMART AAA_5 402 554 IPR003593 -
Lele15g0605 858 Pfam MCM P-loop domain 352 569 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele15g0605 858 Coils Coil 473 493 - -
Lele15g0605 858 CDD MCM8 362 711 - -
Lele15g0605 858 ProSiteProfiles MCM family domain profile. 358 565 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele15g0605 858 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 59 750 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele15g0605 858 FunFam DNA helicase MCM8 isoform X1 179 230 - -
Lele15g0605 858 Gene3D - 336 721 IPR027417 -
Lele15g0605 858 Pfam MCM OB domain 160 280 IPR033762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0605 Lele-ChrLele15 3551819 3557376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0605 17 799 Core DNA Replication Machinery Family AT3G09660 70.140 0.0 1137