Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0590 ATGGCTGGCTCTTGGGTTTCTATTCGTCACTGCTGGCGCCAGCGACCATTACAAACCTTTATAAAAGAAGTGAGGGCATCGACACCCCTCGCTACCACGTTCTTCTCCATCACTAAGCTTTCTCGGACAACCCCATCCATGGCAACCTCAAGCGTGCATGAAGTTCGCCCTCCCACGCTGTCTTCCTCCTCCGACGCACCTCCTGTATTTGATGGAACTACCAGGTTGTACATGAGTTATGGGTGCCCATTTGCACAACGCGTATGGATTACGAGGAACTATAAGGGACTACAAGACCAGATCCAGTTGGTTCCTCTCGACATTCAGGACAGGCCTGCTTGGTATAAAGAGAAAGTCCACCCTGAAAATAAGGTTCCATCGCTAGAGCATGATGGGAAGGTTTTAGGCGAAAGTCTCGACTTGATCAAATACGTGGATGCTAATTTTGAAGGGCCGGTCCTACTTCCTCAAGACCCTGCAAAGAAGGAAGCTGGGGAGCAACTGTTATCGTATGTTGAAACTTTTACCAGAACTGTCTTTTCTTCCTTAAAAGGAGATCCTGTAAATGCAACCAGTGCTTCTTTTGATTACGTGGAGAATGCTCTCGGTAAATTTGATGATGGCCCATTCTTCCTCGGCCTATTTAGTTTGGTAGATGTTGCATATGCTCCCTTTATTGAAAGATTCCAAATAATCTTTTCTGAGATATTTAAGCATGATATCACAGCTGGAAGACCTCGACTAGCGGCATGGATTGAGGAGCTGAACAAGTACGATGCTTATAAACAGACAAAACTTGATCCTACTGAGTTTGTCGAGGTTTTCAAGAAGCGCTTGCTGACCTCATTCTGCATTAGATTACCACCACCTCTACCATCCACTCCAAGCGGAGGAATTCGCCGGAAAGCCAGATCAATGGCAACTGCGGGTGTCGACGAAGTGAAGCCTCCCTCCTTAACTTCCTCTTCCGATCCCCCTTCTCTCTTCGACGGAACCACCAGGCTGTACATCAGTTATGTGTGCCCGTTTGCACAACGCGCATGGATTGCTAGGAACTGCAAGGGACAACAAGGCAACATCAAATTGGTTCCTATAGACCTTCAAAACAGGCCTGCCTGGTACAAGGAGAAAGTCTACCCTGAGAATAAGGTGCCGTCACTGGAGCACAATGGCAAGGTTTTGGGAGAAAGTCTTGATTTGATCAAATATATTGATGCCAATTTTGAAGGACCGGCTCTGTTTCCCGATGATCCTGCCAAGAAAGAGTTCGGTGAGCAGCTGTTATCATATTGTGAAACATTCATTAGAGATTTGTACTCTTCATTGAAAGTAGAAGATCCTGTAAAGCAAACCAGTCCTTCTTTTGATTATTTGGAGAATGCTCTCGGTAAATTTGTTGACGGACCGCTCTTCCTTGGCCAATTTAGTGCGGTGGATGTGGCCTATGTTCCATTCGCTGAAAGATTTCAAATCGTCTTTTCCGAGGTTTTCAAACATGATATTACAGATGGAAGGCCCAAACTTAAAGCATGGTTTGAGGAGCTGAACAAAAATGATGCGTATGTGAAGACGAGAGCTGATCCTCAGGAAATCCTGGACATTTTCAAGAAACGTTTTTTGGCACAGCAGTGA 1632 0.4559 MAGSWVSIRHCWRQRPLQTFIKEVRASTPLATTFFSITKLSRTTPSMATSSVHEVRPPTLSSSSDAPPVFDGTTRLYMSYGCPFAQRVWITRNYKGLQDQIQLVPLDIQDRPAWYKEKVHPENKVPSLEHDGKVLGESLDLIKYVDANFEGPVLLPQDPAKKEAGEQLLSYVETFTRTVFSSLKGDPVNATSASFDYVENALGKFDDGPFFLGLFSLVDVAYAPFIERFQIIFSEIFKHDITAGRPRLAAWIEELNKYDAYKQTKLDPTEFVEVFKKRLLTSFCIRLPPPLPSTPSGGIRRKARSMATAGVDEVKPPSLTSSSDPPSLFDGTTRLYISYVCPFAQRAWIARNCKGQQGNIKLVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYIDANFEGPALFPDDPAKKEFGEQLLSYCETFIRDLYSSLKVEDPVKQTSPSFDYLENALGKFVDGPLFLGQFSAVDVAYVPFAERFQIVFSEVFKHDITDGRPKLKAWFEELNKNDAYVKTRADPQEILDIFKKRFLAQQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0590 543 SUPERFAMILY Thioredoxin-like 327 412 IPR036249 -
Lele15g0590 543 Pfam Glutathione S-transferase, C-terminal domain 192 253 - -
Lele15g0590 543 Pfam Glutathione S-transferase, C-terminal domain 449 513 - -
Lele15g0590 543 Gene3D - 410 543 - -
Lele15g0590 543 Gene3D - 151 283 - -
Lele15g0590 543 FunFam Lambda class glutathione S-transferase 410 542 - -
Lele15g0590 543 CDD GST_C_Lambda 417 536 - -
Lele15g0590 543 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 331 412 IPR004045 -
Lele15g0590 543 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 72 153 IPR004045 -
Lele15g0590 543 FunFam Glutathione S-transferase L2, chloroplastic 306 409 - -
Lele15g0590 543 SUPERFAMILY Thioredoxin-like 67 151 IPR036249 -
Lele15g0590 543 PANTHER GLUTATHIONE S-TRANSFERASE L1 50 279 IPR044629 GO:0004364
Lele15g0590 543 Pfam Glutathione S-transferase, N-terminal domain 335 411 IPR004045 -
Lele15g0590 543 Pfam Glutathione S-transferase, N-terminal domain 76 152 IPR004045 -
Lele15g0590 543 FunFam Glutathione S-transferase L2, chloroplastic 47 150 - -
Lele15g0590 543 SUPERFAMILY GST C-terminal domain-like 408 539 IPR036282 -
Lele15g0590 543 SFLD Glutathione Transferase (cytosolic) 75 256 IPR040079 -
Lele15g0590 543 SFLD Glutathione Transferase (cytosolic) 335 516 IPR040079 -
Lele15g0590 543 Gene3D Glutaredoxin 47 150 - -
Lele15g0590 543 Gene3D Glutaredoxin 306 409 - -
Lele15g0590 543 SUPERFAMILY GST C-terminal domain-like 149 278 IPR036282 -
Lele15g0590 543 SFLD Main (cytGST) 75 256 - -
Lele15g0590 543 CDD GST_C_Lambda 158 276 - -
Lele15g0590 543 FunFam Lambda class glutathione S-transferase 151 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0590 Lele-ChrLele15 3476134 3481439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0590 313 540 Glutathione S-transferase Gene Family AT5G02790 67.544 1.93e-112 332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1815 13 26238977 26253706 Lele15g0590 15 3476134 3481439 hybridization