Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0578 ATGGAGCTCCCCTTCTTTAACCAGTCTCAGCTGGAGCTCCTCCACCTGCCCCACCCACATATCTCCCGTCCCACCCTTGGCGAGCTCCTCAAACGCGTCGATGATGCTCAAAACGACACCCCTCCCCACCGCATAGTCCACCTCCCTCCCCCTCCTTCCTCTTACCCTTTCATTCTTTCCTTCACCAATTTAACTTACAGTGTTAAAGTCCGCCGCAAAACCACCCTCCCTCAAAACCATGTCGCTTCCGAATATAGCAATGCCGGTAAGGGCACCAAGACTCTACTTAACAACATTTCCGGCGAGGCCAGAGACGGACAAATCATGGGAGTGCTCGGTGCCAGTGGCTCTGGCAAATCCACCCTTATCGATGCCCTCGCCGATCGTATCTCCAAGGACAGCTTAAAAGGCCCCGTCACCTTAAACGGCGAGGCTCTGGAGTCCAGACTTCTCAAAGTCATTTCCGCTTACGTAATGCAAGATGACCTACTCTTCCCCATGCTCACCGTCGAGGAGACTCTCATGTTCTCCGCCGAGTTTCGTCTCCCTCGCTCCCTCTCTGCCTCAAAGAAGAAGGCCAGAGTCCAGGCACTCATTGACCAGCTTGGCCTCCGGAACGCCGCCAAAACAGTGATCGGCGATGAAGGCCATCGCGGCGTCTCCGGCGGTGAAAGGCGTCGAGTCTCTATCGGAATCGACATCATCCACGATCCGATCATTCTGTTCCTTGACGAACCTACTTCCGGACTGGATTCCACCAGCGCATTCATGGTTGTTTTGGTCTTGCAACGAATCGCTCAGAGTGGGAGCATCGTGATCATGTCCATACACCAACCAAGTTATAGAATCCTCGGCCTATTAGATCGTTTGATTTTTCTCTCTCGTGGCCAAACCGTATACACCGGCTCTCCCGCCAATCTCCCGCACTTCTTCTCGGAGTTCGGTCACCCTATACCCGACAAGGAGAATCGGACGGAGTTTGCACTGGACCTTATACGTGAGCTCGAAGAATCACCAGGTGGGACCCAGAGTTTAGTGGAATTCAACAGATCGTGGCAGTTACATGCCGCAAAAAATAAACCAGCCACCAACCGATTCTTCACCGGTACACTCAAAGACGCCATTGCCGCCAGCATCTCCAGAGGTAAATTAGTGTGCGGTGCACCGCATCATTCCAACATCACCGCGTCGTCGGTCCCAACATATGCTAATCCATTTTGGACGGAGATGATGGTTATAGCGAAACGATCGATCACCAATTCCAGAAGAATGCCAGAACTATTCGGAATCCGACTCGGTGCGGTTCTCGTAACCGGAGGGATCTTAGCCACCATCTTCTGGCATCTGGATAATACTCCTAAAGGCGTTCAAGAGCGCCTCGGTTTCTTCGCCTTCGCAATGTCCACGACCTTCTACACCTGTGCCGAGGCCTTCCCCATCTTTCTGCAAGAGCGATACATCTTCATGAGAGAAACTGCTTACAATGCATACCGGCGTTGCATTCGCCGCCACCACATTCTGGTCGGTGGGTCTGGCCGGCGGGAGCACCGGCTTCCTGTTCTACTTCCTGGTAATGTTCGCTTCCTTCTTGGCGGGAAGCTCCTTCGTGACGTTCCTATCGTGGATAGTGTCGCACGTGATGCTGGGATTCACTGTGGTGGTGGCTATTCTAGCATACTTCCTTCTGTTCAGCGGATTCTTCATAAGCAGAAACAGGATGCCACTGTACTGGATATGGTTTCATTACATGTCGCTGGTGAAGTACCCGTACGAGGGGTGTTGCAGAACGAGTTCGGGATGGAGCCGCCGAGGTGTTTTGTGAGAGGGACGCAGATGTTCGACAACACGCCGTTGGGGGAGGTGACGATGTCGTTGAAGGTGGAGTTGCTCAAGAGTATGAGTAAGACGTTGGGGATGAGCATCAACAGCGAGACGTGCGTGACCACGGGAGCAGATATACTGAGGCAGCAGGGGATTACGGAGCTGGACAAGTGGAGCTGGTTCTGCGTAACGGTTGCTTGGGGATTTTTCTTTAGTACATCCTATAAATTGCAAATACTCATCCTCATCCTCAAAGGTCAAGGGTTTGAGATTGCAACCGTTGCCGCCGGAGTAAATTTTCCCTGGTGCTGGATTTCTTATCCTTTGTTAATCTTTTTGTCTTATCTCTCGACCTGA 2178 0.5225 MELPFFNQSQLELLHLPHPHISRPTLGELLKRVDDAQNDTPPHRIVHLPPPPSSYPFILSFTNLTYSVKVRRKTTLPQNHVASEYSNAGKGTKTLLNNISGEARDGQIMGVLGASGSGKSTLIDALADRISKDSLKGPVTLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSASKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVLVLQRIAQSGSIVIMSIHQPSYRILGLLDRLIFLSRGQTVYTGSPANLPHFFSEFGHPIPDKENRTEFALDLIRELEESPGGTQSLVEFNRSWQLHAAKNKPATNRFFTGTLKDAIAASISRGKLVCGAPHHSNITASSVPTYANPFWTEMMVIAKRSITNSRRMPELFGIRLGAVLVTGGILATIFWHLDNTPKGVQERLGFFAFAMSTTFYTCAEAFPIFLQERYIFMRETAYNAYRRCIRRHHILVGGSGRREHRLPVLLPGNVRFLLGGKLLRDVPIVDSVARDAGIHCGGGYSSILPSVQRILHKQKQDATVLDMVSLHVAGEVPVRGVLQNEFGMEPPRCFVRGTQMFDNTPLGEVTMSLKVELLKSMSKTLGMSINSETCVTTGADILRQQGITELDKWSWFCVTVAWGFFFSTSYKLQILILILKGQGFEIATVAAGVNFPWCWISYPLLIFLSYLST 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0578 725 SMART AAA_5 105 297 IPR003593 -
Lele15g0578 725 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 44 499 - -
Lele15g0578 725 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Lele15g0578 725 Gene3D - 78 311 IPR027417 -
Lele15g0578 725 Pfam ABC-2 type transporter 410 499 IPR013525 GO:0016020|GO:0140359
Lele15g0578 725 FunFam ABC transporter G family member 6 85 311 - -
Lele15g0578 725 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 320 IPR003439 GO:0005524
Lele15g0578 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 312 IPR027417 -
Lele15g0578 725 Pfam ABC-2 type transporter 277 367 IPR043926 GO:0140359
Lele15g0578 725 Pfam ABC transporter 96 248 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0578 Lele-ChrLele15 3435994 3438569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0578 95 280 Calmodulin-binding Proteins AT2G36910 30.159 5.18e-10 61.2