Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0575 ATGACCGTACTGCACACAAAGTTTGCCGTGCGTGATCGAATTCCGTGTGTAATACACATAAAAGCTGTGTTGTACTTGGAGAACGTGGAGGCGGGCAAGAAGAAGACCCATACGATGTTCGTTGGAGATGGTATTGGGAAGACGATTGTGAAAGCTAGTAGAAATGTGGCGGACGGGTGGAGCACCTTTCTATCTGCTACTGTGGGGGCGCTTCCAATCACCTTAATTCTCACTTTCCTATGACCACCTCCGTTAGTTGCAGGAACGGGATTCATAGGTAAAGATACAAGTATTCAGAACACGGCAGGCCCGGCAAAGCGCCAAGTGGTGGCCCTCAGAAATTACGCCCACCACTCCGCGTTCTACAGATGCAGCTTCCTGGGCTATCAAGATCCGTCTGTTCCAATCACCAGTTCTACCGCCAATGCGACATTTACGGCACGGTGGACTTCACCTTCGGGAACGCGATCGCTCACCAGAGCCTCAGAAAACAGAGCACTGAAACAGAGAACAGAGACGATGTCCTCTGTTTGCATCTCCAATTGCGTCAACGACGCACGAGACCCACGTGTTCCGGTGAGAGCCACGTATGTGAACCTCTACAAGTGGCCGGAATCTGACGCCGAGTTCGTGAGGTCGGTGAGCCATAACCGGAGGAAAGGATCGCAGGTGTACGGGCATCCCAGAGTGGTTGATAGTATCTCCTGCAGACAGATGTATCTGAGAAGCTACAAATTTTCCCGGAAAGAGAGCATGCCGGAGAAAACCCAGAAGTGCTTCGGGAGGGTGAAGGAGAAAGTTGGCCCGGGGAAGAAGAATAAGACTGCTCCGGCGAGGAAAAGGAAGTGTTTGGTTTGGAGGAAAGTGAAGGAAATCTCGTGCTCTGCTCTATTTAGGATTTTCCACAGGTTCTTGTCTTGTGCTGCTAGTGTAGATGTCGTCGATGAAAAGGATTGA 957 0.5078 MTVLHTKFAVRDRIPCVIHIKAVLYLENVEAGKKKTHTMFVGDGIGKTIVKASRNVADGWSTFLSATVGALPITLILTFLXPPPLVAGTGFIGKDTSIQNTAGPAKRQVVALRNYAHHSAFYRCSFLGYQDPSVPITSSTANATFTARWTSPSGTRSLTRASENRALKQRTETMSSVCISNCVNDARDPRVPVRATYVNLYKWPESDAEFVRSVSHNRRKGSQVYGHPRVVDSISCRQMYLRSYKFSRKESMPEKTQKCFGRVKEKVGPGKKNKTAPARKRKCLVWRKVKEISCSALFRIFHRFLSCAASVDVVDEKD 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0575 318 Pfam Pectinesterase 15 131 IPR000070 GO:0030599|GO:0042545
Lele15g0575 318 Gene3D - 8 146 IPR012334 -
Lele15g0575 318 PANTHER OS05G0120300 PROTEIN-RELATED 174 317 - -
Lele15g0575 318 SUPERFAMILY Pectin lyase-like 12 136 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0575 Lele-ChrLele15 3420410 3424607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0575 17 131 Carbohydrate Esterase AT4G02300 53.913 3.99e-32 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1773 14 24710425 24710865 Lele15g0575 15 3420410 3424607 hybridization