Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0569 ATGATTTCATGCGGTTATGCAAGGGAATGTTTGAGCGTGTACGTAAGTATCAGGAAGTCGATCATCAGTGAAGGCGTTTATCATCTGAACGTCGACAAATTGAGCTCGTCAAAGATTCATAAGATGGATTGGGAAGCTCTTGAGTTGAAAATCAAGAGTTGGTTGGAGGCGGTGGAAATTTCGGTTAAGATGCCCTTCCACGGAGAGAGAATCTTAAGCGACCAGGTGTTCGGCGCTTCGCAATCCATTAGCGAATCTTGCTTCGCTGAAATTTCCAGTGATGGGGCCACTTGTCTGTTCCGATTACCCGAACTCGTCGCCAAACAAAGAAATTGCAGCCGGAGAAGATATTTCGGATGCTGGACATGTACTCTGCATTATCTGCACTGTGGCTGGAGATCGAATCCATCTTCTCGTTCGATTCAACCTCTGATATTCGATCTCAAGTCCTCACATCGCTGGTTCAACTCAGCGAGTCTAGTACGTAACTCAAACTGGCAGATAATGCTGGGCTACGAGTGGATGGAGAAGCACGAAGCGAAGATGAAATGGTTCGTAACGAACTACGAGAAGGTGGCATGGGGGGATGTGATTTCGTCGTTGACTGAAAATCCAAAGGCCGTGTTATCGCCAGCGGATGCGCAGGAGATATTTGAGAAATTCAACTTCAGCTTCGAGAAAGCGTACAGGAAGCAGAATTCATTCGTCGTGGCAGATCGGACGCTGAAAGACGAAATCACAGGATCAATTGCGAGAGGAGTTGTTCAGTTTATAGGGAATTTCATGATACGCTTAGGATTCTTGGGGGTTCATTGA 816 0.4645 MISCGYARECLSVYVSIRKSIISEGVYHLNVDKLSSSKIHKMDWEALELKIKSWLEAVEISVKMPFHGERILSDQVFGASQSISESCFAEISSDGATCLFRLPELVAKQRNCSRRRYFGCWTCTLHYLHCGWRSNPSSRSIQPLIFDLKSSHRWFNSASLVRNSNWQIMLGYEWMEKHEAKMKWFVTNYEKVAWGDVISSLTENPKAVLSPADAQEIFEKFNFSFEKAYRKQNSFVVADRTLKDEITGSIARGVVQFIGNFMIRLGFLGVH 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0569 271 Gene3D Exocyst complex component Exo70 157 268 - -
Lele15g0569 271 Gene3D Exocyst complex component Exo70 1 123 - -
Lele15g0569 271 PANTHER EXOCYST COMPLEX PROTEIN EXO70 161 264 IPR004140 GO:0000145|GO:0006887
Lele15g0569 271 SUPERFAMILY Cullin repeat-like 1 262 IPR016159 -
Lele15g0569 271 Pfam Exo70 exocyst complex subunit 160 258 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lele15g0569 271 Pfam Exo70 exocyst complex subunit 52 115 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0569 Lele-ChrLele15 3373328 3374524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0569 158 261 EXO70 exocyst subunit family AT3G09520 42.308 1.95e-21 91.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1838 13 26366750 26367558 Lele15g0569 15 3373328 3374524 hybridization
Lele14g1783 14 24756456 24758279 Lele15g0569 15 3373328 3374524 hybridization