Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0566 ATGGAGAAGCTTCGCCACAAGAGATCCAACGGTCCTACCTCCGCTGATCGCTCCTCCCAACCGCACCCTGCTATCGCTCAAGGAAACAAGGAGGTTCACAGACGGAGAAAACATCCAAATTTGCCCTCCAATTCCAGCTCTTCCGCTAGTGTTGCTGCCCCTAAAGATTCGTCGTCATTTAAATTCGGGTGGAGATCTTCAAAACAACTGTTTGGTACTCCCATAAAAAAGTTACTAGCTGAAGAGATGTCGGGAGAAACTGACTCCAAAAGAAGAGCTCCTAGTGTTATTGCCAGATTGATGGGCCTTGATGGGATGCCCCTTCAACAGCCTGCTAATAAGCAACACAAAAGTTCCTCTGAAGTCCATCTGCAGAGAAGACCACAGTTGGAGATAACTCATAGGGGTCGATCATCCAGGAGAAGCTCAAGGGATCAGCAAGAATTTAAAGATGTCTTTGAGGTCTCAGAGATCCCAAAGGCAGAGAGCTGTAGGTATACATCGCAAGGTGCTGACTCGGTTGCAACTGATGCTGAAATATCATTCATTGAACAGAAGTTCATGGATGCCAAACGTCTGGCAGCTGACAGGGATTCACTCTCTTCAAAGGAATTTGATGATGCACTTGAGGTTCTGGACTCTAACACAGATCTTCTACTAAAATATTTTCAACGGCCAGATTCGTTATTTAAGAAGCATCTAAATGATCTGCAAACTGCTCCACTTCAATCACATTGTAAATACATAGAAGCTATGAGATCAACAGATATGGAGAAGTATGAACAACATCATGACTTCAGCTGGAGGTCAGCTCGGGACACAACTAGGTTGAATTGCAATAGAACTCATCAGAAGCGTCTTGATGGTTATCCTGCACAATTTGACAGAAGGCATGCTGTCCACAGTTCACAAAAATCACCAAAGCTTCAGTTGAGTGGAAAGGACAAACAAGATGCAACGCCCACAAGGATTGTTGTCCTAAAACCCAATATTGGAAAGGTTCAGAATTCTCCAAAATTTATTTCATCGTCTTGTTCTTCACATGCTTTCATATCAGAGTGTGGAAATAGTGCTGCATATCCAGAGGTCAGATATAGGGGCCTTGAATTGAATAAGAGAAACCTTCCTGATACAGTGGGGTTTTCAAGGCAAAATTCAATGGAATCTAGAGAAATCGCTAAGGAAATCACTAGGCGAATGAAAAGTAGTATACACAATGGATCTACGATCTTTTCATCTTCTAGAATTAGAGGATATGCTGGGGATGACAGTTCTTGTGACTTCTCTGAAAATGAATCTGTGGAGGAATCAGAGGTAACATCTGCAACCTTGGCAAACTCTGTTGACTTGAGTAATCATAGCAGGCCATCATCCCGTTCAAGTGAATCATCTGTTAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGACACACAAGTCTCAACAGGTGCAAGCCATCAACAGGGGCAGCACGCTGGCTGAAATGCTTGCTATACCTGATAAGGAAATGAATGCAGCAAATTATAAGATCATGTCGTCTGGGGGAGGTTTCTATAATAAATTTGCCTCCAATAGCACACCTTCTGTGCCAGTTGAACCTTTGGGTATCAGCAGTAAGGATGGCTGGAAGGACGGATGTACTGGAGGTCTGTCAAGATCAAGATCTCTTCCTGCTTCATCCACAGGATTAGGAAGTCCCAGGACACTTCATGTTGATCGATTTATTATGCCGAAGGAGGCCCTTAAGTGGGAAAGAAGAAAAGCTACAAAGAGTTCTTATCAGCAACAAGGTTTGAATACCAGAAACTTAAAATCTGGTCATAAGAAGTCCCTTTCTTCTCATTGTACAAATATGGAAATTTATGATTCTTCACCAGACATTAACACAATCCAAGATAAAGTGAATACCAAGCCCAAAGAAGATCCACCCAAGATAGAAGTTCCATCATCTGATTCATTAACTGAGATCCCCAGAGCTACAAGTGTAATTACTGAAGATGTGGTGGATGCAACACTCGAAAGCGCAGCTGGTTCTTCTGAATCTCCTGATCGAGACCTTCATGAATTACCTTCTGGCATATTGACCAGGGGCAACCCTGGTGCCGTTGAAGAAGACAATTTACGACAGCAGGAACCATCCGTTGGTTCTTCCAGTGGAAGTTCGGTCTCTTGTCAATCACTTGTACCTGGACTTGAATCTTCATGCTGTAAAGATGCTGATCAACCAAGTCCAGTTTCTGTCCTGGAGCCTTCATTTACAGATGATCTATCATCTTGTTCTGAATGTTTTGAAAGTCTTAGCGCTGACCTCCAAGGTCTTCGAATGCAACTTCAGATGCTCAAGTTGGAAAAGTTGGAATCCGAAGAATATGTGGAGGGAGCCGTGCCGATTTCAAGCGATGAAGATGGTGGGGAAGCATATCTTGGAATTTCAGAAGGGAATGATTTAAATGGAGATAGCTGGGAGTCTTCTTACATTATTGATGTCTTGTCTGAGTCTGGCATTGAGGGGGCCTATCCCCTTAAATACGCGGAGGGATGGTACTCTCCTGAGTGCCCCGTGAGTCCAACAGTGTTTGATGAACTTGAAAAGAGGTACTCTGATTGTACAGCTTGTTCAAGGCCAGAAAGGAGGATGCTTTTCGACCATGTAAATTCCGGCATCATGAAGATCTACAGGCAATTCGAGAACGATCGGCCATGGTTGAATCCAACAGTAACAACAAATATAGTTGGTTGTAAACTGATGAAAAAGGGGCTCCAAGATGATTTATGCACTCTGCTGAGGAGCCAAGCAAACGTAAAGGATGACGCTCTGGGAAATGTGCTTGTAAGGGAATCGGAATGGTTGGACGTGAGAGATGGCGTTGACACAGTTGGTAGGGAAGTTGAGAGGTTAATATTAGATGATCTAGTGGCAGAAGTAGCTGGTTCTTTAGACATTTTGTACCCAAAGTAG 2967 0.4338 MEKLRHKRSNGPTSADRSSQPHPAIAQGNKEVHRRRKHPNLPSNSSSSASVAAPKDSSSFKFGWRSSKQLFGTPIKKLLAEEMSGETDSKRRAPSVIARLMGLDGMPLQQPANKQHKSSSEVHLQRRPQLEITHRGRSSRRSSRDQQEFKDVFEVSEIPKAESCRYTSQGADSVATDAEISFIEQKFMDAKRLAADRDSLSSKEFDDALEVLDSNTDLLLKYFQRPDSLFKKHLNDLQTAPLQSHCKYIEAMRSTDMEKYEQHHDFSWRSARDTTRLNCNRTHQKRLDGYPAQFDRRHAVHSSQKSPKLQLSGKDKQDATPTRIVVLKPNIGKVQNSPKFISSSCSSHAFISECGNSAAYPEVRYRGLELNKRNLPDTVGFSRQNSMESREIAKEITRRMKSSIHNGSTIFSSSRIRGYAGDDSSCDFSENESVEESEVTSATLANSVDLSNHSRPSSRSSESSVSREAKKRLSERWKMTHKSQQVQAINRGSTLAEMLAIPDKEMNAANYKIMSSGGGFYNKFASNSTPSVPVEPLGISSKDGWKDGCTGGLSRSRSLPASSTGLGSPRTLHVDRFIMPKEALKWERRKATKSSYQQQGLNTRNLKSGHKKSLSSHCTNMEIYDSSPDINTIQDKVNTKPKEDPPKIEVPSSDSLTEIPRATSVITEDVVDATLESAAGSSESPDRDLHELPSGILTRGNPGAVEEDNLRQQEPSVGSSSGSSVSCQSLVPGLESSCCKDADQPSPVSVLEPSFTDDLSSCSECFESLSADLQGLRMQLQMLKLEKLESEEYVEGAVPISSDEDGGEAYLGISEGNDLNGDSWESSYIIDVLSESGIEGAYPLKYAEGWYSPECPVSPTVFDELEKRYSDCTACSRPERRMLFDHVNSGIMKIYRQFENDRPWLNPTVTTNIVGCKLMKKGLQDDLCTLLRSQANVKDDALGNVLVRESEWLDVRDGVDTVGREVERLILDDLVAEVAGSLDILYPK 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0566 988 MobiDBLite consensus disorder prediction 593 635 - -
Lele15g0566 988 MobiDBLite consensus disorder prediction 588 728 - -
Lele15g0566 988 MobiDBLite consensus disorder prediction 445 463 - -
Lele15g0566 988 MobiDBLite consensus disorder prediction 119 149 - -
Lele15g0566 988 Coils Coil 766 786 - -
Lele15g0566 988 MobiDBLite consensus disorder prediction 1 64 - -
Lele15g0566 988 MobiDBLite consensus disorder prediction 712 728 - -
Lele15g0566 988 MobiDBLite consensus disorder prediction 296 318 - -
Lele15g0566 988 MobiDBLite consensus disorder prediction 464 479 - -
Lele15g0566 988 Pfam DUF761-associated sequence motif 87 109 IPR032795 -
Lele15g0566 988 MobiDBLite consensus disorder prediction 41 64 - -
Lele15g0566 988 MobiDBLite consensus disorder prediction 106 149 - -
Lele15g0566 988 PANTHER AFADIN 30 982 - -
Lele15g0566 988 Pfam Protein of unknown function (DUF3741) 184 228 IPR022212 -
Lele15g0566 988 MobiDBLite consensus disorder prediction 445 486 - -
Lele15g0566 988 MobiDBLite consensus disorder prediction 548 567 - -
Lele15g0566 988 Pfam Domain of unknown function (DUF4378) 826 977 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0566 Lele-ChrLele15 3347148 3351891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0566 68 982 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.034 2.97e-133 424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1139 06 7071433 7074688 Lele15g0566 15 3347148 3351891 CCT
Lele07g1324 07 7989105 7990190 Lele15g0566 15 3347148 3351891 CCT
Lele08g1130 08 7082320 7083405 Lele15g0566 15 3347148 3351891 CCT
Lele13g1842 13 26384161 26388921 Lele15g0566 15 3347148 3351891 hybridization
Lele14g1786 14 24773783 24779019 Lele15g0566 15 3347148 3351891 hybridization