Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0557 ATGGGAGACGGTGCAGTTTGCGTCGAATTACCCGCAGATAGAACAGATGAAAACGATGAGATGTCAAGAACGGACCTGAAGAGGGACTGCCAATGTCTTACTGATACTGCAGTTGACGCCTCCCCGAATAAGAAACAAGCAAAAGAAATCTCAAACGATGACGTGCGCTCTGAAGTTTCTAATCCCAATATTTCTTCGAAAGATAATGTATTAGCATTCCAAGATATTAGTAGCCAGCCCGGCGAGTTGGCAAATACTAATCAAACAGAGTGTGGAGAAGTAACATCTACTTGCTTGGAGAATTCAAGTTCGGATGAGACCTTGGGTGATGGAGGGGGTGATCATGATACTATTTCTCAGAACGATAAGGGCGTGAGCAGTGCTGAAATGACGTCCCGTGTTGTACTGGAAATTCCCAAGCATGCCAGTTCATCTGGAATCAGAAAGATTACTTTTAAGTTCAGTAAAAAGAAGGAGGACTATGATTATCAGCCACTTGCTAGTACTAATAGGAATCCTTACGACGAAGGGCCAAGTTCGGATTATAAGTCGGGGATGTTAGAAAGCTCGTGTGGGATGGAATATGTTCAAGCTGGTGATTTTAACTTGTACGCTCGAAATATGGAGCTGAAAATGTCAAAGAAGGTAGTTCCTAGCTGTTATCCTACAAATGTTAAAAAACTGCTAGCAACTGGTATTCTTGATGGAGCTCGGGTGAAGTACATTTATACTCATAGCGCAGGAAAGATTGAGCTGCCGGGGATTATTCAGGGTGGTGGATATATGTGTGGCTGCTCGTTATGCAGCTTCTCCAGAGTTCTAAGTGCGTATGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGGCATCCAAATAATCACATATTCCTGGAAAACGAAAAACCAATTTATAGTATTATACAGGAAATGAAAACTGCTCCGCTCAGCTTATTAGATGAGGTTATAAAGAATGTTGCTGGTTCATCTGTCAATGAAGAGTCCTTCGAGGTTTGGAAAGCAAGTCTTTTGCAAAGCAATGGGCAGGTTGAGGCAGAAAAGAAGTTTAACTCCATGCTTGCTGGCATGCCTCATACAAACATAAGTCGATTTGTAGATGGTATGAGCGACATGTCCTGTTCAGATGTTCTGAGTCCTGTTGAGCAGCAAAGTTATGTGAAGCAGACAACTGACGAGAGGAAACATGTGGTGAAAAAATCAAGCTCCCATACTTCTAACGCAGGTCTACAGCAAAAGAAAACTGCAGATGGTTGCAATAAGAGAAGGGATAATGATTTGCATAGGCTACTATTTATGCCAAATGGACTACCAGACGGTGCTGAATTGGCTTACTATGTCAAGGGACAGAAACTACTTGGAGGTTACAAACAGGGAAATGGAATAGTTTGTGGTTGTTGTGATAGAGAGATAAGCCCTTCACAGTTTGAAGCTCATGCTGGGATGGCTGCCCGGCGTCAACCTTATCGCCATATATATACTTCCAACGGATTAACACTTCATGATATAGCCCTCTCATTAGCAAATGGTCAAAACCTTACCACGGGAGATAGTGATGACATGTGTGCAGTATGCGGAGATGGAGGGGATTTGATTCTTTGCAATGGATGCCCTAGGGCTTTTCATTCAGTTTGCTTAGGTTTACAGGGTGCTCCTGAAAGCTGTTGGCTTTGTCAAACTTGTAGAGATATTTCTGGCTGCAGCAGATTATCTTCTACCGCAAGGCCAATTAAGATAAGGTTGACCAGGGTTGTTAAAGCGCCAGAATTTGAGATGGGTGGTTGTGTTGTTTGTAGGGAGCATGATTTTAGTGTCGCTAAATTTGACGAGCGAACAGTTATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTCGCATGTTTGCGGGACAGTGGGCTATGTGAGTTGGAAGAATTGCCTAAGGACAAGTGGTTTTGTTGTGATGACTGCAATCGAATATATGTGGCCCTACAAAATTCAGTTTCTGCTGGAGCAGAGATTATACCATCTTCCTTGTCAGCCCTAATAAATAGGAAGCGTGAGGAGAGGGGCTTACCTATTGATGGAGGAGGAATTGATGATATCCAATGGCGAATTCTAAGCGGAAAAAGTCGTTATCCAGAACATTTACCGTTACTTTCACGGGCGGCTGCAATTTTTCGAGAGCGTTTTGATCCCATTGTTGCGGTCTCTGGTCGTGACCTGATTCCTGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAGTTTGGGGGGATGTATTGTGTTGTCTTAATAGTGAAATCTGTTGTTGTATCTGCTGGACTACTTAGGATTTTTGGATGTCATGTTGCCGAGCTTCCAATGGTTGCTACAAGTAGAGAACATCAAGGAAAAGGATATTTTCAAGTGTTATTCTCTTGCATAGAGAAGTTGCTGTTGTCCCTGAAGGTGGAAAAGCTGGTGCTTCCTGCAGCCGAGGATGCTGAATCGATTTGGACTAGAAAATTAGGCTTCCGAAAGCTGACTGAAGACCAGTTATCCAAATATCTCAGAGAGGTGCAGCTCACCCTCTTTAATAAGACTTCGATGCTGGAGAAGACAGTGCAGCTGGCGGTGGAATGA 2616 0.4327 MGDGAVCVELPADRTDENDEMSRTDLKRDCQCLTDTAVDASPNKKQAKEISNDDVRSEVSNPNISSKDNVLAFQDISSQPGELANTNQTECGEVTSTCLENSSSDETLGDGGGDHDTISQNDKGVSSAEMTSRVVLEIPKHASSSGIRKITFKFSKKKEDYDYQPLASTNRNPYDEGPSSDYKSGMLESSCGMEYVQAGDFNLYARNMELKMSKKVVPSCYPTNVKKLLATGILDGARVKYIYTHSAGKIELPGIIQGGGYMCGCSLCSFSRVLSAYEFEQHAGAKTRHPNNHIFLENEKPIYSIIQEMKTAPLSLLDEVIKNVAGSSVNEESFEVWKASLLQSNGQVEAEKKFNSMLAGMPHTNISRFVDGMSDMSCSDVLSPVEQQSYVKQTTDERKHVVKKSSSHTSNAGLQQKKTADGCNKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHSVCLGLQGAPESCWLCQTCRDISGCSRLSSTARPIKIRLTRVVKAPEFEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVACLRDSGLCELEELPKDKWFCCDDCNRIYVALQNSVSAGAEIIPSSLSALINRKREERGLPIDGGGIDDIQWRILSGKSRYPEHLPLLSRAAAIFRERFDPIVAVSGRDLIPVMVYGRNISGQEFGGMYCVVLIVKSVVVSAGLLRIFGCHVAELPMVATSREHQGKGYFQVLFSCIEKLLLSLKVEKLVLPAAEDAESIWTRKLGFRKLTEDQLSKYLREVQLTLFNKTSMLEKTVQLAVE 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0557 871 Gene3D - 747 854 - -
Lele15g0557 871 ProSiteProfiles Zinc finger PHD-type profile. 596 657 IPR019787 -
Lele15g0557 871 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 755 840 IPR016181 -
Lele15g0557 871 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 513 591 - -
Lele15g0557 871 SUPERFAMILY FYVE/PHD zinc finger 511 566 IPR011011 -
Lele15g0557 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 513 593 IPR013083 -
Lele15g0557 871 Pfam Tify domain binding domain 459 508 IPR032308 -
Lele15g0557 871 Pfam Tify domain binding domain 254 308 IPR032308 -
Lele15g0557 871 ProSitePatterns Zinc finger PHD-type signature. 526 565 IPR019786 -
Lele15g0557 871 SUPERFAMILY FYVE/PHD zinc finger 597 652 IPR011011 -
Lele15g0557 871 MobiDBLite consensus disorder prediction 1 24 - -
Lele15g0557 871 MobiDBLite consensus disorder prediction 393 425 - -
Lele15g0557 871 MobiDBLite consensus disorder prediction 10 24 - -
Lele15g0557 871 PANTHER AUTOIMMUNE REGULATOR 16 865 - -
Lele15g0557 871 MobiDBLite consensus disorder prediction 100 129 - -
Lele15g0557 871 ProSitePatterns Zinc finger PHD-type signature. 599 654 IPR019786 -
Lele15g0557 871 FunFam PHD zinc finger protein 597 657 - -
Lele15g0557 871 SMART PHD_3 598 655 IPR001965 -
Lele15g0557 871 SMART PHD_3 525 566 IPR001965 -
Lele15g0557 871 ProSiteProfiles Zinc finger PHD-type profile. 523 568 IPR019787 -
Lele15g0557 871 MobiDBLite consensus disorder prediction 41 66 - -
Lele15g0557 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 657 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0557 Lele-ChrLele15 3280602 3288019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0557 1 866 PHD Transcription Factor Family AT3G53680 53.206 0.0 902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1854 13 26452117 26459574 Lele15g0557 15 3280602 3288019 hybridization
Lele14g1795 14 24819243 24829638 Lele15g0557 15 3280602 3288019 hybridization