Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0540 ATGAAACGGGTGCAGAATAAACAGATTCACAATATTGAGAAACCTTTTCCAGGATGCCTGGGAAGAATGGCAAACCTCTTTGATTTGTCTGCAGGGGTAACTGGAAACAGGCTACTCACAGATAAGCCACATCATGATGCCTCACTTTCAAGGAGCCAATCTGACGTTACAAGGTTCTCGAGTCCTCCTTTTGGCGACCAAATTGAAGATAAATTGATCATTTCTGACTTAACCAGAACATTTTCAAAGAACAAAATAAATGGGACTCCCATCAAGATGCTCATAGACCAAGAAATGTCAAAAGACGTTGACTCTAAGCGCAGCCCACCCAATGTAGTTGCCAAATTAATGGGGCTTGAGGCCCTTCCTCACGAAGATCCTAATTTAGCTGTGCAAAAAAGCTATAGAAAGGATTATACTCAACACTTGTGTGGTCGTTCAGAAAAACCATCCAGACATTGGCAGCTGGAAGATAGTTTTATGGACAAGCAAACGGTACATGAAGTTCATAACACCACTGAACAGGATTACAAGGAAGTTTATGAAATATGGCGTCAATCTAGGGGCACTAGCCATGTAAGAGAGAAGACGCCAGAGAGAGGAAGGCGAAGTCAAAGTCAAAAAATTATGGAAGCAAAAGGTCTGTCTTCAGATGAGAAGATGTGCCAGTCCGATGAAGTTGAAGATGCCTTGGAAGTTTTAAGTTCCAATAAAGATTTATTACTAAAGTTTCTGGCTTCTCAAAATCTTTGTGAATTTCAATCTACACCACCATCTGAGACAAAGCGTATAACTGTTCTTAAACCTTCAAAGATGATTGACAATGACAAGTCTCCTTATAAGGAGAAGAATGATAAACCAGTCAAGAAACCAGCTAATGTTGGGCAAGCAGCTGTATGGGACAAAAGGAATCATGGATACTCTCTAGCCAGTCAGAGGGTTGACGAGTATCCAGTTCAACCTACTCGAATAGTGGTATTGAAGCCTAGCTTTGGGAAGACACATGAGAGTAAGGCTGTGGTTACTCCAACTTCATCCTCATCTCAAGATCTGCAAATTGGAAGTTTCTATCAGGAACCTGAAAATGATGTTCTAGAATCAAGAAAGGCAGCTCAAGAGGTCGCAGAGCAAATGCAAGAAAATCCTAGGGGCCTTCAAAGAGATGAAACTTTGTATTCATCAGTCTTTTCCAATGGCTATACTGGTGATGAGAGCTCATTCAATCAATCAGAAAATGAGCATGCAGCAGGGAATTATAGTGATTCAGAATTTATGTCTCCATCTCCAAGGCATTCTTGGGATTACATCAATCGTACTGGTGGCCCTTATTCTTCATCATCCTTGGGTCGTGCATCCATTTCTCTGGAATCATCTGTACGCAGGGAGGCAAAGAAACGACTCTCTGAAAGATGGGCCATGATGGCATCAAATACGATTCCTCAGGAACAGAGTCAAGCACGGAGAAGCTCTACCTTAGGTGAGATGCTTGCTCTATCTGACATGAAGAAATCTGCAATTTCTCATGTTGAGGTTATTGTCAAAGACCAAGAACCAAGAGAATCTGTTTCCTGCAAAAATAATTTCAATGAAGAACATGTGGGTGATTCTCCGAAAAATCTTTCCAGGTCAAAGTCTGTCCCTGTATCTTCTAATGTCTATGAAACTGGGTTCAATGTTGAAGTTTGCAATTCAGAGGTCGGCAATACACCTATTTGCAAGGAACTGGCAAAGTCAAAGAGCTCGAAGTCATCATTTAAAGGGAAAGTTACAAGTCTGTTCTTCTCAAGGAACAAAAGGTCGTGTAAGGAAAGATCTAGTTTACTTGAATCTAAAAATGAATCCCAAGCTACTACTGTTGAAACTTCGAAATCTCCATCAAATTTTCCTGGGATCCGTGGAGATGATTTGTCTCATAGCTTCAACACTGGTGGCTTTGGAGACCGTTCCCTTCATTATCTATGTGAACCATCGAGTAAATCTTCATCAGATTCAGCCTTAAAGGGACAAAAAGGCCTAATTTCTCTAGAGCTTGGATTGACTGCGTCAAAACCTGGTTCTCTGGGCATATCAAACCAGATCCAGGATCAGCCAAGTCCAATTTCAGTTTTAGAGCTTCCATTTGAAGATGATAATGCAGCTCGAGAATCCTCTGACTGTATGAAGGCTGGCCAATTGGGAGCACAGGGACACTCGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATATCCCGGACCCTCTCATGGGATGATTCTTGTGCAGAGGTAGCAAGTTCGTATCCGCTAAAACCGTTGATGACTTCCTTCGACCCAGCGGCAGAGGAACGAGACTGTCTTGTGTTGGTCCAGAAACTACTATCAGTGGCCGGCATTGATGATCAAGTGCTGTCAGGCTCATTTTACTCAAGATGGTATTCCCCCGAGAGCCCATTGGACCCATCATTGAGGGATAAATATGCCAATCTGAACGACAAGGAGCCTCTCCAGGAGGCCAAACGAAGGCAGCGAAGATCAACTCAGATGCTTATATTTGACTGTGTTTGTGCTATATTAATGGAAATTAGTGGTTACGGATCAGAAAAGTGCTTAACGAGAAGGATGTGCCGGCAACCAGAGGGTGTATCTCCCCTACTGATGGACCTCGTTTTGTCCCGAATGAAGGAAATGACATCTGGTGGGATGAAGTTTGATTGGGGGTATGGTGGTGACAGCAACAGCATGATGATAGAAATGGTTGTTAGGGAGGAGGCTGTGGGGAAGGGATGGTTTGAGCTAAAGGGATTGGAGATTGATATTCTAGGTATGGAAATAGAAGGGAAGTTGCTGGAAGAGCTTGTAGAGGAGGCTGTTGTTGATTTGACTGGTAGGGTCTAA 2880 0.426 MKRVQNKQIHNIEKPFPGCLGRMANLFDLSAGVTGNRLLTDKPHHDASLSRSQSDVTRFSSPPFGDQIEDKLIISDLTRTFSKNKINGTPIKMLIDQEMSKDVDSKRSPPNVVAKLMGLEALPHEDPNLAVQKSYRKDYTQHLCGRSEKPSRHWQLEDSFMDKQTVHEVHNTTEQDYKEVYEIWRQSRGTSHVREKTPERGRRSQSQKIMEAKGLSSDEKMCQSDEVEDALEVLSSNKDLLLKFLASQNLCEFQSTPPSETKRITVLKPSKMIDNDKSPYKEKNDKPVKKPANVGQAAVWDKRNHGYSLASQRVDEYPVQPTRIVVLKPSFGKTHESKAVVTPTSSSSQDLQIGSFYQEPENDVLESRKAAQEVAEQMQENPRGLQRDETLYSSVFSNGYTGDESSFNQSENEHAAGNYSDSEFMSPSPRHSWDYINRTGGPYSSSSLGRASISLESSVRREAKKRLSERWAMMASNTIPQEQSQARRSSTLGEMLALSDMKKSAISHVEVIVKDQEPRESVSCKNNFNEEHVGDSPKNLSRSKSVPVSSNVYETGFNVEVCNSEVGNTPICKELAKSKSSKSSFKGKVTSLFFSRNKRSCKERSSLLESKNESQATTVETSKSPSNFPGIRGDDLSHSFNTGGFGDRSLHYLCEPSSKSSSDSALKGQKGLISLELGLTASKPGSLGISNQIQDQPSPISVLELPFEDDNAARESSDCMKAGQLGAQGHSKSNLIDKSPPIESISRTLSWDDSCAEVASSYPLKPLMTSFDPAAEERDCLVLVQKLLSVAGIDDQVLSGSFYSRWYSPESPLDPSLRDKYANLNDKEPLQEAKRRQRRSTQMLIFDCVCAILMEISGYGSEKCLTRRMCRQPEGVSPLLMDLVLSRMKEMTSGGMKFDWGYGGDSNSMMIEMVVREEAVGKGWFELKGLEIDILGMEIEGKLLEELVEEAVVDLTGRV 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0540 959 MobiDBLite consensus disorder prediction 610 628 - -
Lele15g0540 959 MobiDBLite consensus disorder prediction 273 289 - -
Lele15g0540 959 Pfam DUF761-associated sequence motif 109 124 IPR032795 -
Lele15g0540 959 MobiDBLite consensus disorder prediction 402 426 - -
Lele15g0540 959 Pfam Domain of unknown function (DUF4378) 784 950 IPR025486 -
Lele15g0540 959 Pfam Protein of unknown function (DUF3741) 206 249 IPR022212 -
Lele15g0540 959 MobiDBLite consensus disorder prediction 520 545 - -
Lele15g0540 959 MobiDBLite consensus disorder prediction 273 293 - -
Lele15g0540 959 MobiDBLite consensus disorder prediction 368 389 - -
Lele15g0540 959 MobiDBLite consensus disorder prediction 42 61 - -
Lele15g0540 959 MobiDBLite consensus disorder prediction 188 220 - -
Lele15g0540 959 MobiDBLite consensus disorder prediction 520 538 - -
Lele15g0540 959 MobiDBLite consensus disorder prediction 440 454 - -
Lele15g0540 959 MobiDBLite consensus disorder prediction 440 459 - -
Lele15g0540 959 MobiDBLite consensus disorder prediction 604 635 - -
Lele15g0540 959 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0540 Lele-ChrLele15 3189373 3193064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0540 1 956 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 41.984 0.0 583
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1183 06 7383107 7399032 Lele15g0540 15 3189373 3193064 CCT
Lele07g1372 07 8327048 8328637 Lele15g0540 15 3189373 3193064 CCT
Lele08g1174 08 7379527 7381127 Lele15g0540 15 3189373 3193064 CCT
Lele05g1315 05 8241584 8247532 Lele15g0540 15 3189373 3193064 CCT
Lele13g1869 13 26541017 26544711 Lele15g0540 15 3189373 3193064 hybridization
Lele14g1809 14 24897685 24901379 Lele15g0540 15 3189373 3193064 hybridization