Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0528 ATGTTTTCAGAAGATCAGCCTTTGCCATGGGATGATAAAAACAATTACAAACGTGAATTCATTGAATTATACTATGAGGCTGGTTCTGGAGTTTGTCTCTCAAAGGCAAAACTTCTCCATTGTTTATTAGAAGGAACTGCAGCTTCTCAACATGAAAGTTTTGGTGATGAAGAGAAAGGTGCAGTTCAAGGCTCTAACCATGTCGACACAGACGCTCCTAAATGGGTCAAAGTAAATGAAACGAAGACGCTCCATGATGTTCTGAATGACCACAATTTTATCATTCCTGGCATCCCAGTATTCTATGTTGTCTCAAAGCGATCGAGCTTTTATGGCAAGTTCAAAGCTGGAAAATGGGCTCCTCCAAGCATATGA 375 0.4027 MFSEDQPLPWDDKNNYKREFIELYYEAGSGVCLSKAKLLHCLLEGTAASQHESFGDEEKGAVQGSNHVDTDAPKWVKVNETKTLHDVLNDHNFIIPGIPVFYVVSKRSSFYGKFKAGKWAPPSI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0528 124 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 121 - -
Lele15g0528 124 MobiDBLite consensus disorder prediction 50 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0528 Lele-ChrLele15 3088651 3089759 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0528 15 3088651 3089759 Lele07g1373 07 8348832 8352681 CCT
Lele15g0528 15 3088651 3089759 Lele08g1175 08 7395184 7402512 CCT
Lele13g1882 13 26642505 26644258 Lele15g0528 15 3088651 3089759 hybridization
Lele14g1818 14 24989906 24991096 Lele15g0528 15 3088651 3089759 hybridization