Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0527 ATGGCGCTATGGATGGAAAAGGGTTCTGAGCCCTTGACCGAAAGCGAGAAAGCAGACCTTGATGCTATTGCTGCACTGAAAGAGTCCACTGCTATTGAGCTCAAGGAAAAGGGCAATCAATATGTCAAAATGGGTAAAAAACATTATTCCGATGCTATTGAGTGTTACACAAGGGCAATAAATCAGAAAGTCTTGAGCGACTTAGAGAGCTCAGTTCTTTTTGCAAACAGAGCACATGTAAATTTGCTGCTAGGAAATTATAGACGTGCTCTAACTGATGCAGAGGAGGCAATTAAGTTGTCCCCCTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCATCTCTTTCATTAAATTTGTTGGCCGAAGCTCAATCTCATTGTCAAAACGGCCTTCAGTTGGACCCAAATAATGAAGAATTGAAGAAGCTTGGCCAACAGATTGATCTAAAGAAAGTAGAACAGGAAAAGCATGAAGCTGAAGTCTCCAAAGCTGTTGCAGAGGCAAAGGAACTTGTGTCGGCAATAGAAAATAGAGGCTTGAAGATCGGGAAGGCAATGTTTCGAGAACTTACTGGACTTAAAAAACCAGTATTAGACGGAAATAATATTCTCCATTGGCCTGTTCTTCTCCTGTATGCAGAGGTTATGTCCAGTGACTTCATTGAAGATTTCTGTGAGACTGACATGTTTACAGTTCATCTTGATATTATATCCTTTTCTATAAATCGCTTAGTACGCTTTATATCTGAATGA 756 0.3995 MALWMEKGSEPLTESEKADLDAIAALKESTAIELKEKGNQYVKMGKKHYSDAIECYTRAINQKVLSDLESSVLFANRAHVNLLLGNYRRALTDAEEAIKLSPSNIKAIYRAAKASLSLNLLAEAQSHCQNGLQLDPNNEELKKLGQQIDLKKVEQEKHEAEVSKAVAEAKELVSAIENRGLKIGKAMFRELTGLKKPVLDGNNILHWPVLLLYAEVMSSDFIEDFCETDMFTVHLDIISFSINRLVRFISE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0527 251 Pfam Tetratricopeptide repeat 75 104 IPR019734 GO:0005515
Lele15g0527 251 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 238 - -
Lele15g0527 251 SMART tpr_5 71 104 IPR019734 GO:0005515
Lele15g0527 251 SMART tpr_5 31 66 IPR019734 GO:0005515
Lele15g0527 251 SMART tpr_5 105 138 IPR019734 GO:0005515
Lele15g0527 251 ProSiteProfiles TPR repeat profile. 71 104 IPR019734 GO:0005515
Lele15g0527 251 SUPERFAMILY TPR-like 22 143 IPR011990 GO:0005515
Lele15g0527 251 Coils Coil 141 170 - -
Lele15g0527 251 Gene3D Tetratricopeptide repeat domain 27 174 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0527 Lele-ChrLele15 3086871 3088609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0527 35 160 Calmodulin-binding Proteins AT3G25230 32.117 2.19e-07 49.7