Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0515 ATGACATGCTGGGGAGGTAAAAACTTGCCGCCATTTCCCTCGTACTTTGACCGGGAGGAGAGCGGGAGCGAAGAGACCAGTCAGGGAGCAACGATGTCGAAGAGAGGTCGCGGTGGTTCGGCCGGAAATAAGTTCCGGATGTCACTGGGTCTACCGGTGGCGGCGACGGTGAACTGCGCCGATAACACTGGAGCGAAGAATCTGTACATCATTTCAGTGAAGGGGATCAAGGGTCGCCTTAACCGTTTGCCGTCTGCTTGCGTTGGGGACATGGTCATGGCCACCGTGAAGAAAGGGAAGCCTGATCTCCGAAAGAAGGTCCTGCCCGCCGTGATTGTACGCCAGCGCAAGCCATGGCGCAGAAAGGATGGTGTTTACATGTACTTTGAAGATAATGCTGGTGTCATTGTGAATCCCAAGGGAGAAATGAAAGGTTCTGCTATCACCGGTCCAATCGGCAAAGAGTGTGCAGATTTATGGCCTAGGATTGCAAGTGCAGCAAACGCAATTGTTTGA 516 0.531 MTCWGGKNLPPFPSYFDREESGSEETSQGATMSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0515 171 Pfam Ribosomal protein L14p/L23e 53 171 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele15g0515 171 ProSitePatterns Ribosomal protein L14 signature. 110 136 IPR019972 -
Lele15g0515 171 FunFam 60S ribosomal protein L23 32 171 - -
Lele15g0515 171 Hamap 50S ribosomal protein L14 [rplN]. 50 171 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele15g0515 171 SUPERFAMILY Ribosomal protein L14 42 171 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele15g0515 171 SMART Ribosomal_L14_2 50 171 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele15g0515 171 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 51 170 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele15g0515 171 MobiDBLite consensus disorder prediction 14 41 - -
Lele15g0515 171 Gene3D Ribosomal protein L14 32 171 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0515 Lele-ChrLele15 3008814 3011549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0515 32 171 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 97.857 2.47e-98 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1341 05 8417894 8425835 Lele15g0515 15 3008814 3011549 CCT
Lele15g0515 15 3008814 3011549 Lele15g0515 15 3008814 3011549 ECH
Lele14g1831 14 25060317 25061783 Lele15g0515 15 3008814 3011549 hybridization