Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0511 ATGACAAGCTTTCACAAGGCTTCTGCTCTATTCTTTCATGTACTCTTGCTCTGTTTTCTTCCATGGAAGATAATGGCATCGCTGAGAACAGAAGCAGAAACACTAGTGAAGTGGAAAAACAGTCTGTCTCCTTCTCTTCCTTCTACTCTCAACTCATGGTCCCTCTCCAATACAGACCACCTCTGCAATTGGGGTGCCATAGTCTGTGACAGCACTAATACAACAGTCTCAGAGATAAACCTCTCTGGAGCCAATCTTTCTGGCACACTTACGGGTTTGGATTTCACTTCTCTCCCCAATCTCACCCGCTTGGACCTCGGTTTCAATAGATTCAATGGGTCAATTCCATCTTCTATTGTTAACCTCTCCAAGCTCATTTTCCTGGACTTGGAATACAACTCCCTCAATGGAACTCTGCCTGCTGAGCTAGACCAGCTGAAAGAGCTTCAATATATGAGTTTATACAACAACAACCTTAATGGGACCATTCCTTACCAGGTCACGAGCCTCCAAAAGGTACGGCACCTAGACTTTGGATCAAACTACTTTGTTAATCCTCCTGACTGGTCAAAATATTCAGGCACGTCTTCCTTAACCCACCTCAGTTTGGCTCTCAATAGATTCACTTCTGAATTTCCAAGCTTCATTCTAGAGTGCCGAAATTTGACATATCTAGACGTGTCCTACAATCCGATTAATTTAATACCAGAGTCATTGTATACCCGTCTGCAAAAGCTTGAATACCTCAACATGAGCTATTGTGAACTAGAAGGACACTTGTCATCAAACTTGTCTAAGCTTTCCAATGTGAAAGAAATTCATCTGGGTGTTAACAAGTTGACAGGTTCCATTTTCACGGAGATAGGATCAATATCTGGACTGAAAGTTCTTGAATTGAATGAGAATTTACTCCAGGGGGAAATTCCTTCCTCTCTAGGCCAGCTTAGTAACTTGCGGCGTCTTGATCTCAGCAATAATTCCTTAAATTCTACCATTCCTTCTGAGCTTGGCCTTTGTACCAATCTAACCTACCTGTCTCTAGCAGTGAATTCTCTGTTTGGTTCCTTGCCTATGTCGTTATCCAATCTGACAAAAATTGAAGAATTGGGTTTATCAGATAATCTCTTTACAGGTCAAATCCCTGCTTTGTTGATCTCTAAATGGACTGAGTTATTTTCTTTGCAACTTCAAAACAATAAATTCATGGGAGAAATTCCTGCATCGATTGTCCAATTGACAAAAATTGGACTTCTTTTTCTATACAACAATACATTCTCTGGCCCTATTCCTCCCGAGATTGGGAACTTGCAAGCAACAACACAGTTAGACCTTTCTTCTAACAAATTTTCTGGTCCAATTCCTTCAACCATATGGAGACTAAAGAACATCACAACCATAACTCTTGCCTCGAATAACCTCTCAGGAACCATCCCCATGGAAATTGGAAACCTTACTTCATTGACAAGTTTTGATGTCAACAGTAATCTTCTCCAGGGTGTGTTGCCCAAGACTATTTCCCAGTTAACAAAGTTACAGATTCTTTCTGTATTCACCAACAATTTTTCGGGTGGAATTCCCAGAGATTTTGGGAAGTATAGCCCTGATTTGAGGGTAGTCTTTCTTTCAAATAATAGCTTCTCCGGAGAACTGCCGCCTGATTTGTGCAGCGGTTTTTCACTCACAGACTTAAGGGTGAATAACAACAGTTTCTCAGGACCATTGCCTAAGTGCTTGAGAAATAGCTCGGTATTAAAAGTGGTGAAGCTCGAAAGAAATCAATTCACGGAAAACATCACAGAAGCATTTGGGATTTACCCAAGTCTTACATCCATCACACTCAGTGGTAATCAGTTTGTTGGTGAACTCTCCCCGAAATGGAGTCAATGCAAGAACTTAACCAGGATAGAAATGGATAACAACAAACTTTCTGGGAAAATTCCATCTGAATTGAGTTTGTTAAGCCAATTACAATATCTAAGCCTGCACTCCAATCAATTTACTGGCAGCATTCCACCAGAAATGGGAAATCTAAGGCAACTTTACTTGTTCAACTTGAGTGGTAATCATTTGACAGGAGAAATCCCCCAGAGTCTTGGCAGATTGGGCCGCCTAAATAATCTTGATTTATCAAAGAACAACTTCACTGGAAGCATACCAAAAGAGCTCAGTAACTGTGACAAATTAATTAGCTTGAATTTGAGCCATAACAGTTTAACTAGGGAGATACCATCTGAACTTGGCAATCTGTTCTCGCTCCAATACTTTCTGGACCTCAGCAGCAACTTTCTTTCAGGGCCAATTCCTCAGAACCTAGAAAAGCTCATTCATTTGGAGATCCTCAATGTCTCACACAACAATCTTTCAGGGGCAATCCCACAATCATTTTCAAGCATGCTCAGTCTTCAATCCATCGATTTTTCTTACAACAAGTTGACGGGTCCTATCCCCACTGGGAGTATTTTCCAAACAGCACCTACTGAAGCTTATGTTGGAAATTCGGGTTTGTGTGGCAAGGCAAAAGGATTAATTGCTTGTTCCACAAAATCTTCCCAGGACAAATCTGGAGGGGTCAACAAAAAGATACTTCTTGGTGTTATTATACCAGTTTGTGCGCTACTAATTTTCGTGCTGATTGTTGTTAGAATGCGAGTGTTTCACCAACGGACCAGACTTCCAGAAGAAGAGTCCAGCGATGCTCAAAAGAATGAAAAAACTGTAAGCATGATTTGGGGAAGAAAGAGAAAATTCACATTTGCTGAAATTGTTAAAGCCACAGATGACTTCGATGACAAATGCTGCATCGGAAAAGGAGGTTTTGGAAGTGTTTACAGAGCACAATTACCAACAGGTACAGTTGTCGCCGTCAAAAGACTCAAAATCTCAAACTCCAGTGACATTCCAGCCGAGAATCTTCGGAGTGTTCAGAATGAGATAAAAACCCTTACCGAAGCAAAACACCGCAATATCATCAAGCTTTATGGGTTTTGTTACACAGAGGAACACGCATACTTGGTTTACGAATATGCAGAAAATGGCAGCCTGGGAACAGTGTTGTACGGAGAGGAAATGAAGATGGTGTTAAGCTGGCCTCAAAGGGTGAAAATTGTGCAGGGGATAACACAAGCAATAGCGTACCTGCACAGCGATTGTATCCCACCGGTGGTGCATCGAGATGTTAAGTTGAATAACATATTGTTGAACTCAGAATTTGAACCCCGCCTCGCAGATTTTGGCATAGCAAAGCTTCTTAGGCACAATTCAACAAGCTGGACCTCAATTGCTGGCTCCTACGGTTACATGGCTCCAGAGCTAGCACAGACAATGCGTGTAACAGAGAAGTGTGATGTTTATAGTTTTGGAGTGGTGGTATTAGAGATAGTACTGGGAAAGCACCCTGGCGATTTCTTGGCCACATTGCCCTCAATGGAGAATCCGCAAGTGTTGTTGAAGGATGTAATAGACCAAAGACTCCCACCTCCACAAGCTCGATTGGGTGAAGCGATAGCCTTTATAATGACCATAGCCTTGGCATGCACGCGAACGCACCCCGAGTCTAGACCCAGCATGCATTTTGTGGCCCAACAATTATCGGCTATTGAGCAGACTACTCTAGCTGAGCCCTTTAGCACAATAACCCTAAATAAGCTATCAAGGTTTCATAAGTAG 3666 0.4195 MTSFHKASALFFHVLLLCFLPWKIMASLRTEAETLVKWKNSLSPSLPSTLNSWSLSNTDHLCNWGAIVCDSTNTTVSEINLSGANLSGTLTGLDFTSLPNLTRLDLGFNRFNGSIPSSIVNLSKLIFLDLEYNSLNGTLPAELDQLKELQYMSLYNNNLNGTIPYQVTSLQKVRHLDFGSNYFVNPPDWSKYSGTSSLTHLSLALNRFTSEFPSFILECRNLTYLDVSYNPINLIPESLYTRLQKLEYLNMSYCELEGHLSSNLSKLSNVKEIHLGVNKLTGSIFTEIGSISGLKVLELNENLLQGEIPSSLGQLSNLRRLDLSNNSLNSTIPSELGLCTNLTYLSLAVNSLFGSLPMSLSNLTKIEELGLSDNLFTGQIPALLISKWTELFSLQLQNNKFMGEIPASIVQLTKIGLLFLYNNTFSGPIPPEIGNLQATTQLDLSSNKFSGPIPSTIWRLKNITTITLASNNLSGTIPMEIGNLTSLTSFDVNSNLLQGVLPKTISQLTKLQILSVFTNNFSGGIPRDFGKYSPDLRVVFLSNNSFSGELPPDLCSGFSLTDLRVNNNSFSGPLPKCLRNSSVLKVVKLERNQFTENITEAFGIYPSLTSITLSGNQFVGELSPKWSQCKNLTRIEMDNNKLSGKIPSELSLLSQLQYLSLHSNQFTGSIPPEMGNLRQLYLFNLSGNHLTGEIPQSLGRLGRLNNLDLSKNNFTGSIPKELSNCDKLISLNLSHNSLTREIPSELGNLFSLQYFLDLSSNFLSGPIPQNLEKLIHLEILNVSHNNLSGAIPQSFSSMLSLQSIDFSYNKLTGPIPTGSIFQTAPTEAYVGNSGLCGKAKGLIACSTKSSQDKSGGVNKKILLGVIIPVCALLIFVLIVVRMRVFHQRTRLPEEESSDAQKNEKTVSMIWGRKRKFTFAEIVKATDDFDDKCCIGKGGFGSVYRAQLPTGTVVAVKRLKISNSSDIPAENLRSVQNEIKTLTEAKHRNIIKLYGFCYTEEHAYLVYEYAENGSLGTVLYGEEMKMVLSWPQRVKIVQGITQAIAYLHSDCIPPVVHRDVKLNNILLNSEFEPRLADFGIAKLLRHNSTSWTSIAGSYGYMAPELAQTMRVTEKCDVYSFGVVVLEIVLGKHPGDFLATLPSMENPQVLLKDVIDQRLPPPQARLGEAIAFIMTIALACTRTHPESRPSMHFVAQQLSAIEQTTLAEPFSTITLNKLSRFHK 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0511 1221 ProSiteProfiles Protein kinase domain profile. 928 1204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0511 1221 SMART LRR_typ_2 146 170 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 219 242 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 774 797 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 484 507 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 534 557 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 701 725 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 653 677 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 315 339 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 243 267 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 98 122 IPR003591 -
Lele15g0511 1221 SMART LRR_typ_2 727 749 IPR003591 -
Lele15g0511 1221 ProSitePatterns Protein kinases ATP-binding region signature. 934 956 IPR017441 GO:0005524
Lele15g0511 1221 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 432 529 - -
Lele15g0511 1221 SUPERFAMILY RNI-like 533 815 - -
Lele15g0511 1221 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Lele15g0511 1221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1054 1066 IPR008271 GO:0004672|GO:0006468
Lele15g0511 1221 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 533 849 - -
Lele15g0511 1221 FunFam Leucine-rich repeat receptor protein kinase MSP1 891 1008 - -
Lele15g0511 1221 ProSiteProfiles Leucine-rich repeat profile. 317 339 IPR001611 GO:0005515
Lele15g0511 1221 CDD STKc_IRAK 934 1196 - -
Lele15g0511 1221 FunFam MDIS1-interacting receptor like kinase 2 1009 1202 - -
Lele15g0511 1221 FunFam MDIS1-interacting receptor like kinase 2 193 384 - -
Lele15g0511 1221 Pfam Leucine rich repeat 606 666 IPR001611 GO:0005515
Lele15g0511 1221 Pfam Leucine rich repeat 756 811 IPR001611 GO:0005515
Lele15g0511 1221 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
Lele15g0511 1221 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Lele15g0511 1221 SUPERFAMILY L domain-like 338 527 - -
Lele15g0511 1221 Pfam Protein kinase domain 933 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0511 1221 SMART serkin_6 928 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0511 1221 FunFam Nuclear pore complex protein NUP107 28 187 - -
Lele15g0511 1221 SUPERFAMILY Protein kinase-like (PK-like) 905 1196 IPR011009 -
Lele15g0511 1221 Gene3D Transferase(Phosphotransferase) domain 1 1009 1211 - -
Lele15g0511 1221 SUPERFAMILY RNI-like 78 402 - -
Lele15g0511 1221 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Lele15g0511 1221 Gene3D Ribonuclease Inhibitor 190 503 IPR032675 -
Lele15g0511 1221 Gene3D Ribonuclease Inhibitor 504 847 IPR032675 -
Lele15g0511 1221 Pfam Leucine Rich Repeat 317 335 IPR001611 GO:0005515
Lele15g0511 1221 Pfam Leucine Rich Repeat 727 749 IPR001611 GO:0005515
Lele15g0511 1221 Gene3D Phosphorylase Kinase; domain 1 891 1008 - -
Lele15g0511 1221 PANTHER LEUCINE RICH REPEAT KINASE 2 481 1201 - -
Lele15g0511 1221 SMART LRR_sd22_2 98 124 - -
Lele15g0511 1221 SMART LRR_sd22_2 484 510 - -
Lele15g0511 1221 SMART LRR_sd22_2 219 251 - -
Lele15g0511 1221 SMART LRR_sd22_2 315 338 - -
Lele15g0511 1221 SMART LRR_sd22_2 629 652 - -
Lele15g0511 1221 SMART LRR_sd22_2 339 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0511 Lele-ChrLele15 2987188 2990928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0511 363 816 Receptor kinase-like Gene Family AT4G08850 32.159 5.36e-60 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele15g0511 Pkinase 2.8e-49 CL0016