Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0505 ATGCATTGGTTGGAAAAAATTCAGTTATGGACGTGGCTGTTTGCGGGCTGTGGGCTCGAACCCTCTGCTTTTCATGCTGGAAAAACAAAAGAAGGTAATGAATGCCTATGCTCAGAGGAGCCGTCAAGAGAAGAAGACGATATGGTTCCTTCTTGTCGAATTGACAAGAAGCCAGATACTAGCAATATCGAGAAAGTTGAATCATCCCTTTGTGGAAGTGATTATTTGAACTATGAGGCTATCGTCATAGCCTCACAGGAAGCTAGAGCTCGTTTAGGAAAATATGAATACGAGAAAGGAAATATAGAAGTTGCTTTACATGTTTTTGAGCGAATAGATACAGAGGTTGTAACTTCCATGATTAAAAGTTCTCTTGCCAAAAGGGGAAAGCACCACAAGAGACTTCCCCGGAATTATGCTACGCGTTCATTGTCTATTCGTTCTGTTGGCTTACTGTTGGAAGCATTCTTCCTAAAAGCAAAGTGTTTGCAGGCTCTTGGAAAGTTTAAAGAAGCTGCCCTATCTTGCAAAGTTATTCTGGACATGGTTGAATCTTCATTACCCCAAGGCTTGCCTGAAAACTTTGGTGTTGGATGTAAATTGCAGGAGACTCTGAGCAAGGGGATTTGA 630 0.4175 MHWLEKIQLWTWLFAGCGLEPSAFHAGKTKEGNECLCSEEPSREEDDMVPSCRIDKKPDTSNIEKVESSLCGSDYLNYEAIVIASQEARARLGKYEYEKGNIEVALHVFERIDTEVVTSMIKSSLAKRGKHHKRLPRNYATRSLSIRSVGLLLEAFFLKAKCLQALGKFKEAALSCKVILDMVESSLPQGLPENFGVGCKLQETLSKGI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0505 209 PANTHER PROTEIN NPG1 37 207 IPR043376 -
Lele15g0505 209 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0505 Lele-ChrLele15 2962383 2964582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0505 35 209 Calmodulin-binding Proteins AT4G28600 44.221 1.36e-36 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1903 13 26757588 26760535 Lele15g0505 15 2962383 2964582 hybridization
Lele14g1840 14 25101481 25106816 Lele15g0505 15 2962383 2964582 hybridization