Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0499 ATGGATCATGTGATTGCTGGCAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGATCCTTTGGAGAGCTTTATTTAGGTGTTAACATACAGACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGAGCAGGCATCCACAGCTTCATTATGAATCAAAATTATATATGCTTCTTCAAGGAGGAACGGGGATTCCTCACCTCAAGTGGTTTGGAGTTGATGGAGACTACAATGTTATGGTTATTGACCTTCTTGGGCCAAGCTTAGAAGATCTGTTCAACTATTGCAATCGGAAGTTCAGCTTAAAGACAGTGTTGATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAAAGGATTTCTTCATCGCGACATAAAGCCTGACAATTTTTTAATGGGTCTAGGGCGCAAAGCAAACCAGGTTTACATCATTGATTATGGTCTTGGAAAGAAGTTTAGGGATCTACAGACTCAAAAGCACATACCATACAGAGATAATAAGAACCTTACTGGCACAGCTCGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGAGATGATCTGGAATCTCTTGGTTATGCGCTCATGTACTTCTTAAGAGGAAGCCTTCCCTGGCAAGGTCTGAAGGCTGGCAACAAAAAACAGAAGTATGATAAGATCAGTGAGAAGAAATCATCAACTCCAATAGAGGTTCTCTGCAAATCATACCCATCTGAGTTTGTATCCTACTTCCACTACTGCCGATCATTACGGTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGGCTTTTCCGAGACTTATTTATTCGAGAAGGTTATCAGTTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCTCAGATTGGAGGCAGCTCGAAAGGGCGGCTTGGCAATGGCAAGGCACTTATGAATGCAGGACCATCTATAAAAAAACCGGAAAAGATCCCAGCTGGGAAAGAGATTCGAGAGAAATTTGCTGGTGGTGCTGAAGCATTTCTCGGAAGGAATCCCACAAGTTCTAGTCCTCGTGGTGATCATACCAAAAATAGGATTTTCGAGGAGGTGCCACCACGCAGGGATGTGTATGATCAAGAAAAGGGACGCAGTTCCTCTCGATATGGAAGCACCTCAAGAAAAGCCATAATCTCATCGAAACGGCAGAGTTCCTCCGGTGACCATACTGATGGCCGTACCGGCTGGCTGACGTCAGGTGCCAACCGCCCATCTAGCGCATATAGAACTCAAGCTGTGCATGAGACCAAACAACCAAGTTTTACACGTAACGGGTCTTCAAGAGCTAATCGTGATGATGCTCTCGGGAGATTTGAGCTGCTCTCTATTAGAAAGTAA 1380 0.4312 MDHVIAGKFKLGRKIGSGSFGELYLGVNIQTGEEVAVKLEPVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVDGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSKGFLHRDIKPDNFLMGLGRKANQVYIIDYGLGKKFRDLQTQKHIPYRDNKNLTGTARYASVNTHLGIEQSRRDDLESLGYALMYFLRGSLPWQGLKAGNKKQKYDKISEKKSSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGGSSKGRLGNGKALMNAGPSIKKPEKIPAGKEIREKFAGGAEAFLGRNPTSSSPRGDHTKNRIFEEVPPRRDVYDQEKGRSSSRYGSTSRKAIISSKRQSSSGDHTDGRTGWLTSGANRPSSAYRTQAVHETKQPSFTRNGSSRANRDDALGRFELLSIRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0499 459 MobiDBLite consensus disorder prediction 378 443 - -
Lele15g0499 459 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0499 459 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lele15g0499 459 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0499 459 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Lele15g0499 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lele15g0499 459 FunFam Putative Casein kinase I 1 85 - -
Lele15g0499 459 PANTHER CASEIN KINASE-RELATED 9 397 - -
Lele15g0499 459 MobiDBLite consensus disorder prediction 341 446 - -
Lele15g0499 459 FunFam Casein kinase 1-like protein 1 330 - -
Lele15g0499 459 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0499 459 Gene3D Transferase(Phosphotransferase) domain 1 1 320 - -
Lele15g0499 459 MobiDBLite consensus disorder prediction 356 377 - -
Lele15g0499 459 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0499 Lele-ChrLele15 2940924 2944950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0499 8 213 MAP Kinase Kinase Kinase AT1G54960 26.606 3.69e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele15g0499 Pkinase 6.2e-25 CL0016